GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6I0M designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6I0M_GDP_B_603 | 77% | 25% | 0.092 | 0.936 | 1.17 | 1.78 | 3 | 6 | 3 | 0 | 100% | 1 |
| 6I0M_GDP_A_603 | 72% | 24% | 0.097 | 0.923 | 1.18 | 1.79 | 4 | 7 | 1 | 0 | 100% | 1 |
| 6I0M_GDP_B_602 | 52% | 25% | 0.138 | 0.894 | 1.15 | 1.77 | 3 | 6 | 1 | 0 | 100% | 0.74 |
| 6I0M_GDP_A_602 | 34% | 25% | 0.141 | 0.824 | 1.15 | 1.8 | 3 | 6 | 10 | 0 | 100% | 1 |
| 6I0M_GDP_A_604 | 24% | 25% | 0.166 | 0.799 | 1.14 | 1.81 | 3 | 7 | 4 | 0 | 100% | 0.5 |
| 6I0M_GDP_B_604 | 20% | 23% | 0.161 | 0.767 | 1.17 | 1.88 | 3 | 10 | 0 | 0 | 100% | 0.5 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
