CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 6KAJ designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6KAJ_CDP_B_504 | 92% | 55% | 0.064 | 0.956 | 0.81 | 0.93 | - | 1 | 0 | 0 | 100% | 1 |
6KAJ_CDP_D_504 | 83% | 56% | 0.078 | 0.937 | 0.83 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
6KAJ_CDP_C_504 | 82% | 53% | 0.083 | 0.938 | 0.8 | 1.02 | - | 3 | 3 | 0 | 100% | 1 |
6KAJ_CDP_A_504 | 61% | 55% | 0.109 | 0.898 | 0.87 | 0.85 | - | 1 | 0 | 0 | 100% | 1 |
6KAM_CDP_B_503 | 94% | 55% | 0.062 | 0.96 | 0.81 | 0.92 | - | 1 | 0 | 0 | 100% | 1 |
6SDK_CDP_C_301 | 100% | 5% | 0.043 | 0.987 | 3.72 | 1.58 | 12 | 6 | 0 | 0 | 100% | 1 |
3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
8VHP_CDP_D_809 | 98% | 52% | 0.051 | 0.975 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
2VBU_CDP_A_1133 | 96% | 45% | 0.078 | 0.989 | 0.89 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
1ORR_CDP_B_1301 | 96% | 34% | 0.06 | 0.97 | 1.28 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |