GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6MZE designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6MZE_GDP_D_600 | 40% | 45% | 0.23 | 0.949 | 0.93 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_R_600 | 39% | 44% | 0.238 | 0.954 | 0.93 | 1.13 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_Y_600 | 35% | 45% | 0.223 | 0.919 | 0.95 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_W_600 | 35% | 46% | 0.221 | 0.915 | 0.92 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_K_600 | 29% | 45% | 0.211 | 0.874 | 0.94 | 1.09 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_P_600 | 27% | 45% | 0.25 | 0.909 | 0.92 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_I_600 | 25% | 45% | 0.251 | 0.897 | 0.93 | 1.1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_B_600 | 17% | 45% | 0.311 | 0.907 | 0.93 | 1.11 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9GMY_GDP_B_501 | 100% | 47% | 0.034 | 0.992 | 1.05 | 0.89 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9GNU_GDP_B_501 | 100% | 49% | 0.035 | 0.991 | 1.15 | 0.73 | 2 | - | 0 | 0 | 100% | 1 |
| 9YMG_GDP_B_501 | 100% | 53% | 0.034 | 0.99 | 0.98 | 0.71 | 2 | 1 | 0 | 0 | 100% | 1 |
| 9F07_GDP_F_501 | 99% | 56% | 0.042 | 0.986 | 0.78 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
| 9C3Z_GDP_A_202 | 100% | 34% | 0.016 | 0.998 | 1.18 | 1.33 | 2 | 3 | 0 | 0 | 100% | 1 |
