7NBD | pdb_00007nbd


PLP: PYRIDOXAL-5'-PHOSPHATE



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7NBD_PLP_BBB_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7NBD_PLP_BBB_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7NBD_PLP_BBB_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
7NBD_PLP_BBB_401 97% 59% 0.074 0.9890.78 0.78 1 -00100%1
7NBD_PLP_DDD_401 95% 52% 0.084 0.9870.76 1.09 1 100100%1
7NBD_PLP_AAA_401 95% 43% 0.083 0.9850.85 1.33 1 200100%1
7NBD_PLP_CCC_401 94% 46% 0.084 0.9850.92 1.15 - 210100%1
7NBF_PLP_BBB_401 99% 56% 0.06 0.9870.78 0.9 1 100100%1
7NBG_PLP_BBB_401 98% 56% 0.061 0.9860.75 0.96 1 200100%1
7NBC_PLP_DDD_401 98% 55% 0.067 0.9860.71 1.01 1 100100%1
5X2L_PLP_A_401 87% 52% 0.102 0.9741.01 0.87 - -10100%1
3L6B_PLP_A_350 57% 45% 0.203 0.980.84 1.28 - 200100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
3WQC_PLP_B_402 100% 21% 0.026 0.9961.96 1.38 4 400100%1