SPD: SPERMIDINE

SPD is a Ligand Of Interest in 7XIH designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7XIH_SPD_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7XIH_SPD_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7XIH_SPD_A_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
7XIH_SPD_A_302 72% 38% 0.111 0.9361.18 1.26 1 140100%1
7XIH_SPD_B_302 54% 27% 0.132 0.8971.29 1.65 1 220100%1
7XIF_SPD_C_302 71% 68% 0.131 0.9520.59 0.63 - -20100%1
4C0Z_SPD_A_1223 95% 63% 0.064 0.9660.7 0.73 - -30100%1
5JC9_SPD_DA_3190 92% 97% 0.089 0.9790.12 0.19 - -00100%1
5J7L_SPD_DA_3187 90% 92% 0.094 0.9780.19 0.33 - -00100%1
7XJM_SPD_B_401 90% 91% 0.078 0.9610.25 0.33 - -00100%1