8EZ5 | pdb_00008ez5


SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8EZ5_SQD_A_613Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8EZ5_SQD_A_613Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8EZ5_SQD_A_613Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8EZ5_SQD_A_613 67% 19% 0.129 0.9431.56 1.91 6 120096%1
8EZ5_SQD_a_613 65% 18% 0.131 0.9321.5 1.99 9 1100100%1
8EZ5_SQD_L_101 42% 17% 0.14 0.8731.61 2 9 130091%1
8EZ5_SQD_F_101 38% 17% 0.162 0.9241.6 2 6 130067%1
8EZ5_SQD_B_622 34% 24% 0.174 0.8551.58 1.56 9 800100%1
8EZ5_SQD_f_102 29% 19% 0.181 0.881.68 1.75 8 120076%1
8EZ5_SQD_A_616 21% 26% 0.18 0.841.73 1.28 5 20072%1
8EZ5_SQD_a_614 14% 25% 0.179 0.7841.69 1.35 7 40067%1
5V2C_SQD_a_413 94% 21% 0.075 0.9761.12 2.14 4 1200100%1
5GTI_SQD_A_409 91% 29% 0.066 0.950.98 1.84 3 1300100%1
5WS6_SQD_A_411 87% 32% 0.084 0.9540.88 1.78 2 1200100%1
3WU2_SQD_A_412 78% 25% 0.089 0.9320.86 2.15 2 1700100%1
6DHE_SQD_A_412 78% 20% 0.113 0.9611.05 2.27 5 140096%1
8IRC_SQD_a_411 77% 29% 0.119 0.960.96 1.83 3 1300100%1