Ligand validation:8GBT

PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE

PGV is a Ligand Of Interest in 8GBT designated by the Author

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
8GBT_PGV_A_607	54%	81%	0.209	0.976	0.32	0.49	-	-	0	0	100%	1
8GBT_PGV_N_607	52%	85%	0.21	0.969	0.33	0.4	-	-	0	0	100%	1
8GBT_PGV_C_303	41%	79%	0.25	0.968	0.3	0.55	-	1	2	0	100%	1
8GBT_PGV_P_304	32%	86%	0.28	0.957	0.29	0.43	-	-	2	0	100%	1
8GBT_PGV_U_101	14%	74%	0.287	0.842	0.36	0.63	-	1	0	0	100%	1
8GBT_PGV_C_304	12%	74%	0.255	0.788	0.35	0.64	-	1	0	0	100%	1
8GBT_PGV_M_101	6%	75%	0.368	0.797	0.38	0.58	-	2	0	0	100%	1
8GBT_PGV_Z_101	4%	81%	0.425	0.791	0.35	0.47	-	-	3	0	100%	1
5B1A_PGV_P_303	98%	35%	0.064	0.985	1.06	1.51	3	13	4	0	100%	1
5X1B_PGV_C_302	95%	52%	0.078	0.981	0.92	0.93	2	4	0	0	100%	1
5B1B_PGV_C_302	94%	56%	0.078	0.979	0.81	0.87	1	1	3	0	100%	1
7YPY_PGV_P_302	94%	54%	0.079	0.978	0.79	0.99	2	2	1	0	100%	1
7COH_PGV_C_267	93%	49%	0.087	0.983	0.87	1.09	3	3	0	0	100%	1
5ZCQ_PGV_N_608	90%	32%	0.094	0.978	1.15	1.53	5	8	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.