UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8INV designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8INV_UDP_A_501 | 99% | 4% | 0.043 | 0.983 | 3.69 | 1.99 | 12 | 7 | 0 | 0 | 100% | 1 |
| 8INA_UDP_A_501 | 100% | 4% | 0.023 | 0.995 | 3.62 | 2.05 | 11 | 7 | 0 | 0 | 100% | 1 |
| 8IND_UDP_A_502 | 99% | 4% | 0.042 | 0.984 | 3.76 | 1.96 | 11 | 7 | 0 | 0 | 100% | 1 |
| 8WRK_UDP_A_502 | 98% | 4% | 0.045 | 0.979 | 3.67 | 1.9 | 13 | 8 | 0 | 0 | 100% | 1 |
| 8WRJ_UDP_A_502 | 98% | 4% | 0.047 | 0.981 | 3.75 | 1.95 | 12 | 7 | 0 | 0 | 100% | 1 |
| 8INO_UDP_A_502 | 98% | 4% | 0.05 | 0.978 | 3.77 | 1.98 | 12 | 6 | 1 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
