Ligand validation:8YSE


DTP: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE

DTP is a Ligand Of Interest in 8YSE designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8YSE_DTP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8YSE_DTP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8YSE_DTP_A_401 98% 43% 0.053 0.9781.04 1.18 3 320100%0.77
8YSE_DTP_A_402 43% 38% 0.114 0.8350.91 1.5 1 400100%0.77
5KFU_DTP_A_506 100% 35% 0.044 0.9851.26 1.31 4 320100%1
8VHR_DTP_B_804 100% 69% 0.041 0.9810.58 0.63 - 130100%1
5KG6_DTP_A_506 99% 33% 0.046 0.9841.32 1.34 5 300100%0.9
4ED1_DTP_P_502 99% 49% 0.05 0.9870.7 1.27 - 300100%1
5KG2_DTP_A_506 99% 30% 0.05 0.9861.37 1.41 5 300100%0.75