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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Li, X."

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Search Summary

This query matches 693 Structures.

Refinements

Structure Determination Methodology

experimental (693)

Scientific Name of Source Organism

	Homo sapiens (286)
	Mus musculus (56)
	synthetic construct (48)
	Saccharomyces cerevisiae S288C (28)
	Escherichia coli (18)
	Bos taurus (14)
	Arabidopsis thaliana (13)
	Enterovirus A71 (12)
	Escherichia coli K-12 (11)
	Mycobacterium tuberculosis H37Rv (11)

More...

Taxonomy

	Eukaryota (429)
	Bacteria (181)
	Riboviria (75)
	other sequences (48)
	unclassified sequences (19)
	Varidnaviria (10)
	Archaea (9)
	Duplodnaviria (7)
	Eukaryota (eukaryotes) (4)
	Riboviria (RNA viruses and viroids) (1)

Experimental Method

	X-RAY DIFFRACTION (398)
	ELECTRON MICROSCOPY (261)
	SOLUTION NMR (23)
	ELECTRON CRYSTALLOGRAPHY (10)
	NEUTRON DIFFRACTION (1)

Polymer Entity Type

	Protein (690)
	RNA (58)
	DNA (36)

Refinement Resolution (Å)

	0.5 - 1.0 (7)
	1.0 - 1.5 (18)
	1.5 - 2.0 (91)
	2.0 - 2.5 (160)
	2.5 - 3.0 (151)
	3.0 - 3.5 (138)
	3.5 - 4.0 (65)
	4.0 - 4.5 (24)
	> 4.5 (16)

Release Date

	1990 - 1994 (3)
	1995 - 1999 (5)
	2000 - 2004 (11)
	2005 - 2009 (54)
	2010 - 2014 (127)
	2015 - 2019 (175)
	2020 - 2024 (299)
	2025 - 2029 (19)

Enzyme Classification Name

	Hydrolases (125)
	Transferases (84)
	Oxidoreductases (37)
	Lyases (26)
	Translocases (20)
	Isomerases (15)
	Ligases (12)

Membrane Protein Annotation

	PDBTM (154)
	mpstruc (115)
	OPM (100)
	MemProtMD (98)

Symmetry Type

	Asymmetric (420)
	Cyclic (220)
	Dihedral (40)
	Icosahedral (21)
	Helical (6)

SCOP Classification

	All beta proteins (73)
	Alpha and beta proteins (a/b) (40)
	Alpha and beta proteins (a+b) (43)
	Artifacts (27)
	Coiled coil proteins (5)
	All alpha proteins (16)
	Membrane and cell surface proteins and peptides (2)
	Peptides (5)
	Small proteins (3)

AllSelected

1 to 25 of 693 Structures

Page 1 of 28

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118D \| pdb_0000118d	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES

Bingman, C.A., Li, X., Zon, G., Sundaralingam, M.

(1992) Biochemistry 31: 12803-12812

Released	1993-02-11
Method	X-RAY DIFFRACTION 1.64 Å
Macromolecule	DNA (5'-D(GPTPGPCPGPCPAPC)-3') (nucleic acid)

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1BBA \| pdb_00001bba	Download File View File

SEQUENCE-SPECIFIC 1H NMR ASSIGNMENTS AND SOLUTION STRUCTURE OF BOVINE PANCREATIC POLYPEPTIDE

Li, X., Sutcliffe, M.J., Schwartz, T.W., Dobson, C.M.

(1992) Biochemistry 31: 1245-1253

Released	1993-10-31
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	BOVINE PANCREATIC POLYPEPTIDE (protein)

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1C9W \| pdb_00001c9w	Download File View File

CHO REDUCTASE WITH NADP+

Ye, Q., Li, X., Hyndman, D., Flynn, T.G., Jia, Z.

(2000) Proteins 38: 41-48

Released	2000-01-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Cricetulus griseus
Macromolecule	CHO REDUCTASE (protein)
Unique Ligands	NAP

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1CS3 \| pdb_00001cs3	Download File View File

STRUCTURE OF BTB/POZ TRANSCRIPTION REPRESSION DOMAIN FROM PROMELOCYTIC LEUKEMIA ZINC FINGER ONCOPROTEIN

Li, X., Rauscher III, F.J., Marmorstein, R.

(1999) Cancer Res 59: 5275-5282

Released	1999-08-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ZINC FINGER PROTEIN PLZF (protein)
Unique Ligands	GOL, MG

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1IAT \| pdb_00001iat	Download File View File

CRYSTAL STRUCTURE OF HUMAN PHOSPHOGLUCOSE ISOMERASE/NEUROLEUKIN/AUTOCRINE MOTILITY FACTOR/MATURATION FACTOR

Read, J.A., Pearce, J., Li, X., Muirhead, H., Chirgwin, J., Davies, C.

(2001) J Mol Biology 309: 447-463

Released	2001-05-30
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHOGLUCOSE ISOMERASE (protein)
Unique Ligands	BME, SO4

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1KDU \| pdb_00001kdu	Download File View File

SEQUENTIAL 1H NMR ASSIGNMENTS AND SECONDARY STRUCTURE OF THE KRINGLE DOMAIN FROM UROKINASE

Li, X., Bokman, A.M., Llinas, M., Smith, R.A.G., Dobson, C.M.

(1994) J Mol Biology 235: 1548-1559

Released	1993-10-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PLASMINOGEN ACTIVATOR (protein)

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1QSN \| pdb_00001qsn	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae Tetrahymena thermophila
Macromolecule	HISTONE H3 (protein) TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	COA

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1QSR \| pdb_00001qsr	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND ACETYL-COENZYME A

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tetrahymena thermophila
Macromolecule	TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	ACO

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1QST \| pdb_00001qst	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Tetrahymena thermophila
Macromolecule	TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	EPE

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1QXK \| pdb_00001qxk	Download File View File

Monoacid-Based, Cell Permeable, Selective Inhibitors of Protein Tyrosine Phosphatase 1B

Xin, Z., Liu, G., Abad-Zapatero, C., Pei, Z., Szczepankiewick, B.G., Li, X., Zhang, T., Hutchins, C.W., Hajduk, P.J., Ballaron, S.J., Stashko, M.A., Lubben, T.H., Trevillyan, J.M., Jirousek, M.R.

(2003) Bioorg Med Chem Lett 13: 3947-3950

Released	2003-10-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Protein-tyrosine phosphatase, non-receptor type 1 (protein)
Unique Ligands	429

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1U6D \| pdb_00001u6d	Download File View File

Crystal structure of the Kelch domain of human Keap1

Li, X., Zhang, D., Hannink, M., Beamer, L.J.

(2004) J Biological Chem 279: 54750-54758

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	kelch-like ECH-associated protein 1 (protein)

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1VFQ \| pdb_00001vfq	Download File View File

The Crystal Structure of Human Coactosin-like Protein at 1.9 A Resolution

Li, X., Liu, Y., Liu, X., Lou, Z.

(2004) Protein Sci 13: 2845-2851

Released	2005-01-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Coactosin-like protein (protein)

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1VM2 \| pdb_00001vm2	Download File View File

Solution structure of an anticancer peptide designed based on the N-terminal sequence of E. coli enzyme IIA (Glucose)

Wang, G., Li, X.

(2005) J Biological Chem 280: 5803-5811

Released	2004-12-07
Method	SOLUTION NMR
Macromolecule	peptide A2 (protein)

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1VM3 \| pdb_00001vm3	Download File View File

Solution structure of a membrane-targeting peptide designed based on the N-terminal sequence of E. coli enzyme IIA (Glucose)

Wang, G., Li, X.

(2005) J Biological Chem 280: 5803-5811

Released	2004-12-07
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	peptide A3 (protein)

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1VM4 \| pdb_00001vm4	Download File View File

Solution structure of an antibacterial and antitumor peptide designed based on the N-terminal membrane anchor of E. coli enzyme IIA (Glucose)

Wang, G., Li, X.

(2005) J Biological Chem 280: 5803-5811

Released	2004-12-07
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	peptide A4 (protein)

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1VM5 \| pdb_00001vm5	Download File View File

Solution structure of micelle-bound aurein 1.2, an antimicrobial and anticancer peptide from an Australian frog

Wang, G., Li, X.

(2005) J Biological Chem 280: 5803-5811

Released	2004-12-07
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	peptide A5 or aurein 1.2 (protein)

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1WDF \| pdb_00001wdf	Download File View File

crystal structure of MHV spike protein fusion core

Xu, Y., Liu, Y., Lou, Z., Qin, L., Li, X., Bai, Z., Tien, P., Gao, G.F., Rao, Z.

(2004) J Biological Chem 279: 30514-30522

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	E2 glycoprotein (protein)

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1WDG \| pdb_00001wdg	Download File View File

crystal structure of MHV spike protein fusion core

Xu, Y., Liu, Y., Lou, Z., Qin, L., Li, X., Bai, Z., Tien, P., Gao, G.F., Rao, Z.

(2004) J Biological Chem 279: 30514-30522

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	E2 glycoprotein (protein)

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1XXE \| pdb_00001xxe	Download File View File

RDC refined solution structure of the AaLpxC/TU-514 complex

Coggins, B.E., McClerren, A.L., Jiang, L., Li, X., Rudolph, J., Hindsgaul, O., Raetz, C.R.H., Zhou, P.

(2005) Biochemistry 44: 1114-1126

Released	2004-11-23
Method	SOLUTION NMR
Organisms	Aquifex aeolicus
Macromolecule	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (protein)
Unique Ligands	TUX, ZN

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1Y4E \| pdb_00001y4e	Download File View File

NMR structure of transmembrane segment IV of the NHE1 isoform of the Na+/H+ exchanger

Slepkov, E.R., Rainey, J.K., Li, X., Liu, Y., Lindhout, D.A., Sykes, B.D., Fliegel, L.

(2005) J Biological Chem 280: 17863-17872

Released	2005-02-01
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Sodium/hydrogen exchanger 1 (protein)

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1ZGK \| pdb_00001zgk	Download File View File

1.35 angstrom structure of the Kelch domain of Keap1

Li, X., Bottoms, C.A., Hannink, M., Beamer, L.J.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1335-1342

Released	2005-10-04
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	Kelch-like ECH-associated protein 1 (protein)

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1ZTY \| pdb_00001zty	Download File View File

Crystal Structure of the Chitin Oligasaccharide Binding Protein

Xu, S., Li, X., Roseman, R., Stock, A.M.

To be published

Released	2006-06-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Vibrio cholerae
Macromolecule	Chitin Oligosaccharide Binding Protein (protein)

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1ZU0 \| pdb_00001zu0	Download File View File

Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein

Xu, S., Li, X., Roseman, R., Stock, A.M.

To be published

Released	2006-06-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Vibrio cholerae
Macromolecule	Chitin Oligosaccharide Binding Protein (protein)
Unique Ligands	MN
Unique branched monosaccharides	NAG

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1ZVF \| pdb_00001zvf	Download File View File

The crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from Saccharomyces cerevisiae

Li, X., Guo, M., Teng, M., Niu, L.

To be published

Released	2006-06-02
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	3-hydroxyanthranilate 3,4-dioxygenase (protein)
Unique Ligands	NI