RCSB PDB: Search

5HT0 \| pdb_00005ht0	Download File View File

Crystal structure of an Antibiotic_NAT family aminoglycoside acetyltransferase HMB0038 from an uncultured soil metagenomic sample in complex with coenzyme A

Xu, Z., Stogios, P.J., Wawrzak, Z., Skarina, T., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2016-03-02
Method	X-RAY DIFFRACTION 2.752 Å
Organisms	uncultured bacterium
Macromolecule	Aminoglycoside acetyltransferase HMB0005 (protein)
Unique Ligands	COA, SO4

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5US1 \| pdb_00005us1	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(2')-Ia in complex with N2'-acetylgentamicin C1A and coenzyme A

Stogios, P.J., Evdokimova, E., Xu, Z., Wawrzak, Z., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2018) ACS Infect Dis 4: 980-987

Released	2017-03-15
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Providencia stuartii
Macromolecule	Aminoglycoside 2'-N-acetyltransferase (protein)
Unique Ligands	8MM, ACO, COA, GOL, TAR

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6CD7 \| pdb_00006cd7	Download File View File

Crystal structure of APH(2")-IVa in complex with plazomicin

Stogios, P.J., Evdokimova, E., Dong, A., Di Leo, R., Savchenko, A., Satchell, K.J., Joachimiak, J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2018) ACS Infect Dis 4: 980-987

Released	2018-02-28
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Enterococcus casseliflavus
Macromolecule	APH(2'')-Id (protein)
Unique Ligands	CL, EDS

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6MMZ \| pdb_00006mmz	Download File View File

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H29A mutant apoenzyme

Stogios, P.J., Skarina, T., Xu, Z., Yim, V., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2018-10-24
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	uncultured bacterium
Macromolecule	Aminoglycoside N(3)-acetyltransferase (protein)
Unique Ligands	CL, SO4

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6MN0 \| pdb_00006mn0	Download File View File

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA

Stogios, P.J., Skarina, T., Zu, X., Yim, V., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	uncultured bacterium
Macromolecule	Aminoglycoside N(3)-acetyltransferase (protein)
Unique Ligands	ACO, CL, GOL, PE3, SO4

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6MN3 \| pdb_00006mn3	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, apoenzyme

Stogios, P.J., Evdokimova, E., Wawrzak, Z., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Aminoglycoside N(3)-acetyltransferase, AAC(3)-IVa (protein)
Unique Ligands	CL, ZN

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6MN4 \| pdb_00006mn4	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with apramycin

Stogios, P.J., Evdokimova, E., Michalska, K., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	Aminoglycoside N(3)-acetyltransferase, AAC(3)-IVa (protein)
Unique Ligands	AM2, EDO, EPE, GOL, PO4, ZN

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6MN5 \| pdb_00006mn5	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A

Stogios, P.J., Evdokimova, E., Kim, Y., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Escherichia coli
Macromolecule	Aminoglycoside N(3)-acetyltransferase, AAC(3)-IVa (protein)
Unique Ligands	EDO, EPE, GOL, LLL, PE3, ZN

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7KES \| pdb_00007kes	Download File View File

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, mutant H168A in complex with apramycin and CoA

Stogios, P.J., Skarina, T., Michalska, K., Xu, Z., Yim, V., Savchenko, A., Joachimiak, A., Satchell, K.J., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2020-10-21
Method	X-RAY DIFFRACTION 2.36 Å
Organisms	uncultured bacterium
Macromolecule	Aminoglycoside N(3)-acetyltransferase (protein)
Unique Ligands	AM2, CL, COA, GOL

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7LAO \| pdb_00007lao	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IIb

Stogios, P.J., Evdokimova, E., Osipiuk, J., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2021-01-20
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Serratia marcescens
Macromolecule	Aminoglycoside N(3)-acetyltransferase III (protein)
Unique Ligands	EPE, MG

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7LAP \| pdb_00007lap	Download File View File

Crystal structure of aminoglycoside acetyltransferase AAC(3)-Xa

Stogios, P.J., Skarina, T., Kim, Y., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Commun Biol 5: 263-263

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Streptomyces griseus
Macromolecule	Aminoglycoside N(3)-acetyltransferase (protein)
Unique Ligands	CL, FMT, TAR

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7UUK \| pdb_00007uuk	Download File View File

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with tobramycin

Stogios, P.J., Evdokimova, E., Di Leo, R., Bordeleau, E., Wright, G.D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID)

(2024) Nat Chem Biol 20: 234-242

Released	2023-04-19
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Staphylococcus aureus
Macromolecule	Aminocyclitol acetyltransferase ApmA (protein)
Unique Ligands	CL, TOY

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7UUL \| pdb_00007uul	Download File View File

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with kanamycin B and coenzyme A

Stogios, P.J., Evdokimova, E., Di Leo, R., Bordeleau, E., Wright, G.D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

(2024) Nat Chem Biol 20: 234-242

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Staphylococcus aureus
Macromolecule	Aminocyclitol acetyltransferase ApmA (protein)
Unique Ligands	9CS, CL, COA, EDO, SO4

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7UUM \| pdb_00007uum	Download File View File

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with paromomycin and coenzyme A

Stogios, P.J., Evdokimova, E., Osipiuk, J., Di Leo, R., Bordeleau, E., Wright, G.D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

(2024) Nat Chem Biol 20: 234-242

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Staphylococcus aureus
Macromolecule	Aminocyclitol acetyltransferase ApmA (protein)
Unique Ligands	COA, GOL, PAR

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7UUN \| pdb_00007uun	Download File View File

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with neomycin

Stogios, P.J., Evdokimova, E., Di Leo, R., Osipiuk, J., Bordeleau, E., Wright, G.D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

(2024) Nat Chem Biol 20: 234-242

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.83 Å
Organisms	Staphylococcus aureus
Macromolecule	Aminocyclitol acetyltransferase ApmA (protein)
Unique Ligands	EDO, NMY

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7UUO \| pdb_00007uuo	Download File View File

Crystal structure of aminoglycoside resistance enzyme ApmA H135A mutant, complex with tobramycin and coenzyme A

Stogios, P.J., Evdokimova, E., Michalska, K., Di Leo, R., Bordeleau, E., Wright, G.D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

(2024) Nat Chem Biol 20: 234-242

Released	2022-11-02
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Staphylococcus aureus
Macromolecule	Aminocyclitol acetyltransferase ApmA (protein)
Unique Ligands	COA, EDO, TOY

5HT0 | pdb_00005ht0

Crystal structure of an Antibiotic_NAT family aminoglycoside acetyltransferase HMB0038 from an uncultured soil metagenomic sample in complex with coenzyme A

5US1 | pdb_00005us1

Crystal structure of aminoglycoside acetyltransferase AAC(2')-Ia in complex with N2'-acetylgentamicin C1A and coenzyme A

6CD7 | pdb_00006cd7

Crystal structure of APH(2")-IVa in complex with plazomicin

6MMZ | pdb_00006mmz

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H29A mutant apoenzyme

6MN0 | pdb_00006mn0

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA

6MN3 | pdb_00006mn3

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, apoenzyme

6MN4 | pdb_00006mn4

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with apramycin

6MN5 | pdb_00006mn5

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A

7KES | pdb_00007kes

Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, mutant H168A in complex with apramycin and CoA

7LAO | pdb_00007lao

Crystal structure of aminoglycoside acetyltransferase AAC(3)-IIb

7LAP | pdb_00007lap

Crystal structure of aminoglycoside acetyltransferase AAC(3)-Xa

7UUK | pdb_00007uuk

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with tobramycin

7UUL | pdb_00007uul

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with kanamycin B and coenzyme A

7UUM | pdb_00007uum

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with paromomycin and coenzyme A

7UUN | pdb_00007uun

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with neomycin

7UUO | pdb_00007uuo

Crystal structure of aminoglycoside resistance enzyme ApmA H135A mutant, complex with tobramycin and coenzyme A

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

5HT0 | pdb_00005ht0

5US1 | pdb_00005us1

6CD7 | pdb_00006cd7

6MMZ | pdb_00006mmz

6MN0 | pdb_00006mn0

6MN3 | pdb_00006mn3

6MN4 | pdb_00006mn4

6MN5 | pdb_00006mn5

7KES | pdb_00007kes

7LAO | pdb_00007lao

7LAP | pdb_00007lap

7UUK | pdb_00007uuk

7UUL | pdb_00007uul

7UUM | pdb_00007uum

7UUN | pdb_00007uun

7UUO | pdb_00007uuo