RCSB PDB: Search

3ZN8	Download File View File

Structural Basis of Signal Sequence Surveillance and Selection by the SRP-SR Complex

von Loeffelholz, O., Knoops, K., Ariosa, A., Zhang, X., Karuppasamy, M., Huard, K., Schoehn, G., Berger, I., Shan, S.O., Schaffitzel, C.

(2013) Nat Struct Mol Biol 20: 604

Released	2013-03-06
Method	ELECTRON MICROSCOPY 12 Å
Organisms	Escherichia coli Saccharolobus solfataricus Saccharomyces cerevisiae
Macromolecule	DIPEPTIDYL AMINOPEPTIDASE B (protein) SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN (protein) SIGNAL RECOGNITION PARTICLE PROTEIN (protein) SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY (protein) 4.5 S RNA (nucleic acid)
Unique Ligands	MG

5AKA	Download File View File

EM structure of ribosome-SRP-FtsY complex in closed state

von Loeffelholz, O., Jiang, Q., Ariosa, A., Karuppasamy, M., Huard, K., Berger, I., Shan, S., Schaffitzel, C.

(2015) Proc Natl Acad Sci U S A 112: 3943-3948

Released	2015-03-25
Method	ELECTRON MICROSCOPY 5.7 Å
Organisms	Escherichia coli K-12
Macromolecule	Unique protein chains: 31 Unique nucleic acid chains: 3
Unique Ligands	MG

5WBM	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A4G, SO4

5WBO	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A1Y, CIT, GOL, SO4

5WBP	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A2J, GOL, SO4

5WBQ	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A3J, CL, SO4

5WBR	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A3Y, CIT, GOL, SO4

5WBZ	Download File View File

Structure of human Ketohexokinase complexed with hits from fragment screening

(2017) J Med Chem 60: 7835-7849

Released	2017-09-13
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	A4J, CIT, SO4

Schaffitzel, C., Schaffitzel, C.

6FEC	Download File View File

Human cap-dependent 48S pre-initiation complex

(2018) Nucleic Acids Res 46: 2678-2689

Released	2018-03-14
Method	ELECTRON MICROSCOPY 6.3 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 47 Unique nucleic acid chains: 3

6Q7L	Download File View File

Spiral structure of E. coli RavA in the RavA-LdcI cage-like complex

Arragain, B., Felix, J., Malet, H., Gutsche, I., Jessop, M.

(2020) Commun Biol 3: 46-46

Released	2020-02-12
Method	ELECTRON MICROSCOPY 7.6 Å
Organisms	Escherichia coli
Macromolecule	ATPase RavA (protein) Inducible lysine decarboxylase (protein)
Unique Ligands	ADP, PLP

6Q7M	Download File View File

Spiral structure of E. coli RavA in the RavA-LdcI cage-like complex

Arragain, B., Felix, J., Malet, H., Gutsche, I., Jessop, M.

(2020) Commun Biol 3: 46-46

Released	2020-02-12
Method	ELECTRON MICROSCOPY 7.8 Å
Organisms	Escherichia coli
Macromolecule	ATPase RavA (protein) Inducible lysine decarboxylase (protein)
Unique Ligands	ADP, PLP

6SZA	Download File View File

MoxR AAA-ATPase RavA, C2-symmetric closed ring conformation

Jessop, M., Felix, J., Gutsche, I.

(2020) Commun Biol 3: 46-46

Released	2020-02-19
Method	ELECTRON MICROSCOPY 6 Å
Organisms	Escherichia coli K-12
Macromolecule	RavA (protein)
Unique Ligands	ADP

6SZB	Download File View File

MoxR AAA-ATPase RavA, spiral open ring conformation

Jessop, M., Felix, J., Gutsche, I.

(2020) Commun Biol 3: 46-46

Released	2020-02-19
Method	ELECTRON MICROSCOPY 7 Å
Organisms	Escherichia coli K-12
Macromolecule	RavA + Mg-ADP (protein)
Unique Ligands	ADP

6W0N	Download File View File

Structure of KHK in complex with compound 2

(2020) J Med Chem 63: 13546-13560

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	CIT, RYS, SO4

6W0W	Download File View File

Structure of KHK in complex with compound 3

(2020) J Med Chem 63: 13546-13560

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	RZA, SO4

6W0X	Download File View File

Structure of KHK in complex with compound 4 (6-[(1~{S},5~{R})-6-(hydroxymethyl)-3-azabicyclo[3.1.0]hexan-3-yl]-2-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridine-3-carbonitrile)

(2020) J Med Chem 63: 13546-13560

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	S6J, SO4

6W0Y	Download File View File

Structure of KHK in complex with compound 6 (2-[(1~{R},5~{S})-3-[5-cyano-6-[(2~{S},3~{R})-2-methyl-3-oxidanyl-azetidin-1-yl]-4-(trifluoromethyl)pyridin-2-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid)

(2020) J Med Chem 63: 13546-13560

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	S6S, SO4

6W0Z	Download File View File

Structure of KHK in complex with compound 8 (2-[(1~{S},5~{R})-3-[2-[(2~{S})-2-methylazetidin-1-yl]-6-(trifluoromethyl)pyrimidin-4-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid)

(2020) J Med Chem 63: 13546-13560

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Ketohexokinase (protein)
Unique Ligands	S6D, SO4

6Y3X	Download File View File

Crystal structure of the Francisella novicida lysine decarboxylase LdcF

Felix, J., Siebert, C., Gutsche, I., Renesto, P.

(2021) Sci Rep 11: 972-972

Released	2021-01-27
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Francisella tularensis subsp. novicida
Macromolecule	Lysine decarboxylase (protein)

6YN5	Download File View File

Inducible lysine decarboxylase LdcI decamer, pH 7.0

Jessop, M., Felix, J., Desfosses, A., Effantin, G., Gutsche, I.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-01-13
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Escherichia coli K-12
Macromolecule	Inducible lysine decarboxylase (protein)

6YN6	Download File View File

Inducible lysine decarboxylase LdcI stacks, pH 5.7

Felix, J., Jessop, M., Desfosses, A., Effantin, G., Gutsche, I.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-01-13
Method	ELECTRON MICROSCOPY 3.28 Å
Organisms	Escherichia coli K-12
Macromolecule	Inducible lysine decarboxylase (protein)

7P9B	Download File View File

Providencia stuartii Arginine decarboxylase (Adc), decamer structure

Jessop, M., Desfosses, A., Bacia-Verloop, M., Gutsche, I.

(2022) Commun Biol 5: 317-317

Released	2022-04-20
Method	ELECTRON MICROSCOPY 2.45 Å
Organisms	Providencia stuartii
Macromolecule	Biodegradative arginine decarboxylase (protein)

7PK6	Download File View File

Providencia stuartii Arginine decarboxylase (Adc), stack structure

Jessop, M., Desfosses, A., Bacia-Verloop, M., Gutsche, I.

(2022) Commun Biol 5: 317-317

Released	2022-04-20
Method	ELECTRON MICROSCOPY 2.15 Å
Organisms	Providencia stuartii
Macromolecule	Biodegradative arginine decarboxylase (protein)

Pellegrini, E., Cusack, S.

8AZA	Download File View File

Structure of RIP2K dimer bound to the XIAP BIR2 domain

(2023) Life Sci Alliance 6:

Released	2022-10-26
Method	ELECTRON MICROSCOPY 3.15 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase XIAP (protein) Receptor-interacting serine/threonine-protein kinase 2 (protein)
Unique Ligands	ZN