RCSB PDB: Search

1E1C \| pdb_00001e1c	Download File View File

METHYLMALONYL-COA MUTASE H244A Mutant

Evans, P.R., Thoma, N.H.

(2000) Biochemistry 39: 9213

Released	2000-05-07
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	METHYLMALONYL-COA MUTASE ALPHA CHAIN (protein) METHYLMALONYL-COA MUTASE BETA CHAIN (protein)
Unique Ligands	B12, DCA

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1PZQ \| pdb_00001pzq	Download File View File

Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain

Broadhurst, R.W., Nietlispach, D., Wheatcroft, M.P., Leadlay, P.F., Weissman, K.J.

(2003) Chem Biol 10: 723-731

Released	2004-02-24
Method	SOLUTION NMR
Organisms	Saccharopolyspora erythraea
Macromolecule	Erythronolide synthase (protein)

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1PZR \| pdb_00001pzr	Download File View File

Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS2 and DEBS3: the B domain

Broadhurst, R.W., Nietlispach, D., Wheatcroft, M.P., Leadlay, P.F., Weissman, K.J.

(2003) Chem Biol 10: 723-731

Released	2004-02-24
Method	SOLUTION NMR
Organisms	Saccharopolyspora erythraea
Macromolecule	Erythronolide synthase (protein)

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1REQ \| pdb_00001req	Download File View File

METHYLMALONYL-COA MUTASE

Evans, P.R., Mancia, F.

(1996) Structure 4: 339-350

Released	1997-01-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	METHYLMALONYL-COA MUTASE (protein)
Unique Ligands	B12, DCA, GOL

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2REQ \| pdb_00002req	Download File View File

METHYLMALONYL-COA MUTASE, NON-PRODUCTIVE COA COMPLEX, IN OPEN CONFORMATION REPRESENTING SUBSTRATE-FREE STATE

Evans, P.R., Mancia, F.

(1998) Structure 6: 711-720

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	METHYLMALONYL-COA MUTASE (protein)
Unique Ligands	B12, COA

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2YJN \| pdb_00002yjn	Download File View File

Structure of the glycosyltransferase EryCIII from the erythromycin biosynthetic pathway, in complex with its activating partner, EryCII

Moncrieffe, M.C., Fernandez, M.J., Spiteller, D., Matsumura, H., Gay, N.J., Luisi, B.F., Leadlay, P.F.

(2012) J Mol Biology 415: 92

Released	2011-11-09
Method	X-RAY DIFFRACTION 3.091 Å
Organisms	Saccharopolyspora erythraea NRRL 2338
Macromolecule	DTDP-4-KETO-6-DEOXY-HEXOSE 3,4-ISOMERASE (protein) GLYCOSYLTRANSFERASE (protein)

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3KUV \| pdb_00003kuv	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK - T42S mutant in complex with acetate.

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl coenzyme A thioesterase (protein)
Unique Ligands	ACT

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3KUW \| pdb_00003kuw	Download File View File

Structural basis of the activity ans substrate specificity of the fluoroacetyl-CoA thioesterase FlK - T42S mutant in complex with Fluoro-acetate

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl coenzyme A thioesterase (protein)
Unique Ligands	FAH

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3KV7 \| pdb_00003kv7	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK - wild type FlK in complex with acetate

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	fluoroacetyl-CoA thioesterase FlK (protein)
Unique Ligands	ACT

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3KV8 \| pdb_00003kv8	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK - Wild type FlK in complex with fluoro-acetate

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase FlK (protein)
Unique Ligands	FAH

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3KVI \| pdb_00003kvi	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK - T42A mutant in complex with fluoro-acetate

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-28
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase FlK (protein)
Unique Ligands	FAH

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3KVU \| pdb_00003kvu	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA FlK - T42S mutant in complex with Acetyl-CoA

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase FlK (protein)
Unique Ligands	ACO

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3KVZ \| pdb_00003kvz	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thiesterase FlK - wild type FlK in complex with FAcCPan

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase FlK (protein)
Unique Ligands	ENV

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3KW1 \| pdb_00003kw1	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA FlK - Wild type FlK in complex with FAcOPan

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase (protein)
Unique Ligands	ENW

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3KX7 \| pdb_00003kx7	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA FlK - apo wild type FlK

Dias, M.V.B., Huang, F., Chirgadze, D.Y., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	Fluoroacetyl-CoA thioesterase FlK (protein)

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3KX8 \| pdb_00003kx8	Download File View File

Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK

Chirgadze, D.Y., Dias, M.V.B., Huang, F., Tosin, M., Spiteller, D., Valentine, E.F., Leadlay, P.F., Spencer, J.B., Blundell, T.L.

(2010) J Biological Chem 285: 22495-22504

Released	2010-04-28
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	fluoroacetyl-CoA thioesterase (protein)

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3REQ \| pdb_00003req	Download File View File

METHYLMALONYL-COA MUTASE, SUBSTRATE-FREE STATE (POOR QUALITY STRUCTURE)

Evans, P.R., Mancia, F.

(1998) Structure 6: 711-720

Released	1998-03-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	METHYLMALONYL-COA MUTASE (protein)
Unique Ligands	ADN, B12

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5CXO \| pdb_00005cxo	Download File View File

Intriguing role of epoxide hydrolase/cyclase-like enzyme SalBIII in pyran ring formation in polyether salinomycin

Dias, M.V.B., Luhavaya, H., Williams, S.R., Hong, H., Oliveira, L.G., Leadlay, P.F.

(2015) Angew Chem Int Ed Engl 54: 13622-13625

Released	2015-09-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptomyces albus
Macromolecule	Epoxide hydrolase (protein)
Unique Ligands	P6G

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5REQ \| pdb_00005req	Download File View File

Methylmalonyl-COA MUTASE, Y89F Mutant, substrate complex

Evans, P.R., Thomae, N.H.

(1998) Biochemistry 37: 14386-14393

Released	1998-08-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Propionibacterium freudenreichii subsp. shermanii
Macromolecule	PROTEIN (METHYLMALONYL-COA MUTASE ALPHA-SUBUNIT) (protein) PROTEIN (METHYLMALONYL-COA MUTASE BETA-SUBUNIT) (protein)
Unique Ligands	B12, GOL, MCD, SCD

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5TYQ \| pdb_00005tyq	Download File View File

Crystal structure of a holoenzyme methyltransferase involved in the biosynthesis of gentamicin

Bury, P., Huang, F., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.163 Å
Organisms	Micromonospora echinospora
Macromolecule	Putative gentamicin methyltransferase (protein)
Unique Ligands	MG, SAH

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5U0N \| pdb_00005u0n	Download File View File

Crystal structure of a methyltransferase in complex with the substrate involved in the biosynthesis of gentamicin

Bury, P., Huang, F., Li, S., Sun, Y., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.115 Å
Organisms	Micromonospora echinospora
Macromolecule	Putative gentamicin methyltransferase (protein)
Unique Ligands	7XP, MG, SAH

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5U0T \| pdb_00005u0t	Download File View File

Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with (1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside

Bury, P., Huang, F., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.109 Å
Organisms	Micromonospora echinospora
Macromolecule	Putative gentamicin methyltransferase (protein)
Unique Ligands	7QM, MG, SAH

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5U18 \| pdb_00005u18	Download File View File

Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the Geneticin

Bury, P., Huang, F., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.195 Å
Organisms	Micromonospora echinospora
Macromolecule	N-3'' methyltransferase (protein)
Unique Ligands	GET, SAH

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5U19 \| pdb_00005u19	Download File View File

Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with (1R,2S,3S,4R,6R)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside

Bury, P., Huang, F., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 1.902 Å
Organisms	Micromonospora echinospora
Macromolecule	Putative gentamicin methyltransferase (protein)
Unique Ligands	827, MG, SAH

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5U1E \| pdb_00005u1e	Download File View File

Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the kanamycin B

Bury, P., Huang, F., Leadlay, P., Dias, M.V.B.

(2017) ACS Chem Biol 12: 2779-2787

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.213 Å
Organisms	Micromonospora echinospora
Macromolecule	Putative gentamicin methyltransferase (protein)
Unique Ligands	9CS, SAH

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1E1C | pdb_00001e1c

1PZQ | pdb_00001pzq

1PZR | pdb_00001pzr

1REQ | pdb_00001req

2REQ | pdb_00002req

2YJN | pdb_00002yjn

3KUV | pdb_00003kuv

3KUW | pdb_00003kuw

3KV7 | pdb_00003kv7

3KV8 | pdb_00003kv8

3KVI | pdb_00003kvi

3KVU | pdb_00003kvu

3KVZ | pdb_00003kvz

3KW1 | pdb_00003kw1

3KX7 | pdb_00003kx7

3KX8 | pdb_00003kx8

3REQ | pdb_00003req

5CXO | pdb_00005cxo

5REQ | pdb_00005req

5TYQ | pdb_00005tyq

5U0N | pdb_00005u0n

5U0T | pdb_00005u0t

5U18 | pdb_00005u18

5U19 | pdb_00005u19

5U1E | pdb_00005u1e