RCSB PDB: Search

232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

QUERY: Enzyme Classification Number = 3.2.2.23

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This query matches 81 Structures.

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1EE8	Download File View File

CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8

Sugahara, M., Mikawa, T., Kumasaka, T., Yamamoto, M., Kato, R., Fukuyama, K., Inoue, Y., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2000) EMBO J 19: 3857-3869

Released	2001-01-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermus thermophilus HB8
Macromolecule	MUTM (FPG) PROTEIN (protein)
Unique Ligands	ZN

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1K82	Download File View File

Crystal structure of E.coli formamidopyrimidine-DNA glycosylase (Fpg) covalently trapped with DNA

Gilboa, R., Zharkov, D.O., Golan, G., Fernandes, A.S., Gerchman, S.E., Matz, E., Kycia, J.H., Grollman, A.P., Shoham, G.

(2002) J Biol Chem 277: 19811-19816

Released	2002-06-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	formamidopyrimidine-DNA glycosylase (protein) 5'-D(CPCPAPGPGPAP(PED)PGPAPAPGPCPC)-3' (nucleic acid) 5'-D(GPGPCPTPTPCPCPTPCPCPTPGPG)-3' (nucleic acid)
Unique Ligands	ZN

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1KFV	Download File View File

Crystal Structure of Lactococcus lactis Formamido-pyrimidine DNA Glycosylase (alias Fpg or MutM) Non Covalently Bound to an AP Site Containing DNA.

Serre, L., Pereira de Jesus, K., Boiteux, S., Zelwer, C., Castaing, B.

(2002) EMBO J 21: 2854-2865

Released	2002-06-14
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Lactococcus lactis
Macromolecule	Formamido-pyrimidine DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(PDI)PTPTPTPCPTPC)-3' (nucleic acid) 5'-D(GPAPGPAPAPAPCPAPAPAPGPAPG)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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1L1T	Download File View File

MutM (Fpg) Bound to Abasic-Site Containing DNA

Fromme, J.C., Verdine, G.L.

(2002) Nat Struct Biol 9: 544-552

Released	2002-06-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCPAP(HPD)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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1L1Z	Download File View File

MutM (Fpg) Covalent-DNA Intermediate

Fromme, J.C., Verdine, G.L.

(2002) Nat Struct Biol 9: 544-552

Released	2002-06-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCPAP(PED)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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1L2B	Download File View File

MutM (Fpg) DNA End-Product Structure

Fromme, J.C., Verdine, G.L.

(2002) Nat Struct Biol 9: 544-552

Released	2002-06-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGPGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCPGPTPCPC(AD2))-3' (nucleic acid) 5'-D(PGPTPCPTPAPCP*C)-3' (nucleic acid)
Unique Ligands	ZN

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1L2C	Download File View File

MutM (Fpg)-DNA Estranged Thymine Mismatch Recognition Complex

Fromme, J.C., Verdine, G.L.

(2002) Nat Struct Biol 9: 544-552

Released	2002-06-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGGPTPAPGPAPCPTPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCPAP(HPD)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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1NNJ	Download File View File

Crystal structure Complex between the Lactococcus lactis Fpg and an abasic site containing DNA

Serre, L., Pereira de Jesus, K., Boiteux, S., Zelwer, C., Castaing, B.

(2005) Nucleic Acids Res 33: 5936-5944

Released	2003-02-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(PDI)PTPTPTPCPTPCPG)-3' (nucleic acid) 5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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1PJI	Download File View File

Crystal structure of wild type Lactococcus lactis FPG complexed to a 1,3 propanediol containing DNA

Pereira, K., Serre, L., Zelwer, C., Castaing, B.

(2005) Nucleic Acids Res 33: 5936-5944

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus cremoris
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) DNA (5'-D(CPTPCPTPTPTP(PDI)PTPTPTPCPTPCPG)-3') (nucleic acid) DNA (5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3') (nucleic acid)
Unique Ligands	GOL, ZN

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1PJJ	Download File View File

Complex between the Lactococcus lactis Fpg and an abasic site containing DNA.

Serre, L., Pereira de Jesus, K., Boiteux, S., Zelwer, C., Castaing, B.

(2005) Nucleic Acids Res 33: 5936-5944

Released	2004-06-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) DNA (5'-D(CPTPCPTPTPTP(3DR)PTPTPTPCPTPCPG)-3') (nucleic acid) DNA (5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3') (nucleic acid)
Unique Ligands	GOL, ZN

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1PM5	Download File View File

Crystal structure of wild type Lactococcus lactis Fpg complexed to a tetrahydrofuran containing DNA

Pereira de Jesus-Tran, K., Serre, L., Zelwer, C., Castaing, B.

(2005) Nucleic Acids Res 33: 5936-5944

Released	2004-07-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Lactococcus cremoris
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) DNA (5'-D(CPTPCPTPTPTP(3DR)PTPTPTPCPTPCPG)-3') (nucleic acid) DNA (5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3') (nucleic acid)
Unique Ligands	GOL, ZN

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1R2Y	Download File View File

MutM (Fpg) bound to 8-oxoguanine (oxoG) containing DNA

Fromme, J.C., Verdine, G.L.

(2003) J Biol Chem 278: 51543-51548

Released	2003-10-14
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGPGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCPGPTPCPCPAP(8OG)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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1R2Z	Download File View File

MutM (Fpg) bound to 5,6-dihydrouracil (DHU) containing DNA

Fromme, J.C., Verdine, G.L.

(2003) J Biol Chem 278: 51543-51548

Released	2003-10-14
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	MutM (protein) 5'-D(APGPGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCPGPTPCPCPAP(DHU)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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1TDZ	Download File View File

Crystal Structure Complex Between the Lactococcus Lactis FPG (Mutm) and a FAPY-dG Containing DNA

Coste, F., Ober, M., Carell, T., Boiteux, S., Zelwer, C., Castaing, B.

(2004) J Biol Chem 279: 44074-44083

Released	2004-09-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	formamidopyrimidine-DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(FOX)PTPTPTPCPTPCPG)-3' (nucleic acid) 5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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1XC8	Download File View File

CRYSTAL STRUCTURE COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA

Coste, F., Ober, M., Carell, T., Boiteux, S., Zelwer, C., Castaing, B.

(2004) J Biol Chem 279: 44074-44083

Released	2005-09-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Lactococcus cremoris
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(FOX)PTPTPTPCPTPCPG)-3' (nucleic acid) 5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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2F5N	Download File View File

MutM crosslinked to undamaged DNA sampling A:T base pair IC1

Banerjee, A., Santos, W.L., Verdine, G.L.

(2006) Science 311: 1153-1157

Released	2006-03-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	formamidopyrimidine-DNA glycosidase (protein) 5'-D(APGPGPTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCPAPGPGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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2F5O	Download File View File

MutM crosslinked to undamaged DNA sampling G:C base pair IC3

Banerjee, A., Santos, W.L., Verdine, G.L.

(2006) Science 311: 1153-1157

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	formamidopyrimidine-DNA glycosidase (protein) 5'-D(APGPGPTPAPGPAPTPCPCPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCPGPGPAPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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2F5P	Download File View File

MutM crosslinked to undamaged DNA sampling A:T base pair IC2

Banerjee, A., Santos, W.L., Verdine, G.L.

(2006) Science 311: 1153-1157

Released	2006-03-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacillus stearothermophilus synthetic construct
Macromolecule	formamidopyrimidine-DNA glycosidase (protein) 5'-D(APGPGPTPAPGPAPCPTPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCPGTPCPCPAPAPGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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2F5Q	Download File View File

Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2

Banerjee, A., Santos, W.L., Verdine, G.L.

(2006) Science 311: 1153-1157

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	formamidopyrimidine-DNA glycosidase (protein) 5'-D(APGPGTPAPGPAPCPCPTPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCPGTPCPCPAP(8OG)PGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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2F5S	Download File View File

Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC1

Banerjee, A., Santos, W.L., Verdine, G.L.

(2006) Science 311: 1153-1157

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	formamidopyrimidine-DNA glycosidase (protein) 5'-D(APGPGPTPAPGPAPCPTPCPGPGPAPCPGPC)-3' (nucleic acid) 5'-D(TPGPCGPTPCPCP(8OG)PAPGPTPCPTPAPCPC)-3' (nucleic acid)
Unique Ligands	ZN

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2XZF	Download File View File

CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND AN OXIDIZED PYRIMIDINE CONTAINING DNA AT 293K

LeBihan, Y.V., Izquierdo, M.A., Coste, F., Culard, F., Gehrke, T.H., Essalhi, K., Aller, P., Carrel, T., Castaing, B.

(2011) Nucleic Acids Res 39: 6277

Released	2011-10-05
Method	X-RAY DIFFRACTION 1.799 Å
Organisms	Lactococcus cremoris synthetic construct
Macromolecule	FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (protein) 5'-D(CPTPCPTPTPTPVETPTPTPTPCPTPCPGP)-3' (nucleic acid) 5'-D(GPAPGPAPAPAPCPAPAPAPGPAPGPCP)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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2XZU	Download File View File

CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND AN OXIDIZED PYRIMIDINE CONTAINING DNA AT 310K

Lebihan, Y.V., Izquierdo, M.A., Coste, F., Culard, F., Gehrke, T.H., Essalhi, K., Aller, P., Carrel, T., Castaing, B.

(2011) Nucleic Acids Res 39: 6277

Released	2011-10-05
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Lactococcus cremoris synthetic construct
Macromolecule	FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (protein) 5'-D(CPTPCPTPTPTPVETPTPTPTPCPTPCPG)-3' (nucleic acid) 5'-D(GPCPGPAPGPAPAPAPCPAPAPAPG*A)-3' (nucleic acid)
Unique Ligands	GOL, ZN

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3A42	Download File View File

Crystal structure of MvNei1

Imamura, K., Wallace, S., Doublie, S.

(2009) J Biol Chem 284: 26174-26183

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Acanthamoeba polyphaga mimivirus
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein)
Unique Ligands	GOL, SO4

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3A45	Download File View File

Crystal structure of MvNei1_2

Imamura, K., Wallace, S., Doublie, S.

(2009) J Biol Chem 284: 26174-26183

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acanthamoeba polyphaga mimivirus
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein)
Unique Ligands	K

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3A46	Download File View File

Crystal structure of MvNei1/THF complex

Imamura, K., Wallace, S., Doublie, S.

(2009) J Biol Chem 284: 26174-26183

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Acanthamoeba polyphaga mimivirus
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) DNA (nucleic acid)
Unique Ligands	GOL