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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "TRANSFERASE,ISOMERASE"

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Mycobacterium tuberculosis H37Rv (3)
	Escherichia coli K-12 (2)
	Homo sapiens (2)
	Listeria monocytogenes EGD-e (2)
	Corynebacterium glutamicum (1)
	Escherichia phage ID21 (1)
	Escherichia phage phiX174 (1)
	Geobacillus sp. GHH01 (1)

Taxonomy

	Bacteria (9)
	Eukaryota (2)
	Monodnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (9)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (5)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (2)
	2010 - 2014 (4)
	2015 - 2019 (3)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (10)
	Isomerases (10)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Dihedral (5)
	Cyclic (4)
	Asymmetric (2)

SCOP Classification

	Alpha and beta proteins (a/b) (4)
	Alpha and beta proteins (a+b) (2)
	Artifacts (2)

AllSelected

1 to 11 of 11 Structures

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2W19 \| pdb_00002w19	Download File View File

Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis

Okvist, M., Sasso, S., Roderer, K., Gamper, M., Codoni, G., Krengel, U., Kast, P.

(2009) EMBO J 28: 2128

Released	2009-07-07
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE AROG (protein) CHORISMATE MUTASE (protein)
Unique Ligands	GOL, SO4

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2W1A \| pdb_00002w1a	Download File View File

Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis with bound tsa

Okvist, M., Sasso, S., Roderer, K., Gamper, M., Codoni, G., Krengel, U., Kast, P.

(2009) EMBO J 28: 2128

Released	2009-07-07
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE AROG (protein) CHORISMATE MUTASE (protein)
Unique Ligands	CE1, GOL, MN, PG4, SO4, TSA

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3MDY \| pdb_00003mdy	Download File View File

Crystal structure of the cytoplasmic domain of the bone morphogenetic protein receptor type-1B (BMPR1B) in complex with FKBP12 and LDN-193189

Chaikuad, A., Sanvitale, C., Mahajan, P., Daga, N., Cooper, C., Krojer, T., Alfano, I., Knapp, S., von Delft, F., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A., Structural Genomics Consortium (SGC)

To be published

Released	2010-05-19
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Bone morphogenetic protein receptor type-1B (protein) Peptidyl-prolyl cis-trans isomerase FKBP1A (protein)
Unique Ligands	LDN

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3NVT \| pdb_00003nvt	Download File View File

1.95 Angstrom crystal structure of a bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase (aroA) from Listeria monocytogenes EGD-e

Halavaty, A.S., Light, S.H., Minasov, G., Shuvalova, L., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) Protein Sci 21: 887-895

Released	2010-07-28
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Listeria monocytogenes EGD-e
Macromolecule	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (protein)
Unique Ligands	ACT, MN

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3TFC \| pdb_00003tfc	Download File View File

1.95 Angstrom crystal structure of a bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase (aroA) from Listeria monocytogenes EGD-e in complex with phosphoenolpyruvate

Light, S.H., Minasov, G., Halavaty, A.S., Shuvalova, L., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

(2012) Protein Sci 21: 887-895

Released	2011-08-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Listeria monocytogenes EGD-e
Macromolecule	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (protein)
Unique Ligands	CL, MN, PEP

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4C02 \| pdb_00004c02	Download File View File

Crystal structure of human ACVR1 (ALK2) in complex with FKBP12.6 and dorsomorphin

Williams, E., Riesebos, E., Vollmar, M., Krojer, T., Bradley, A., Shrestha, L., Kupinska, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.

Ph D Thesis

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	ACTIVIN RECEPTOR TYPE-1 (protein) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP1B (protein)
Unique Ligands	EDO, FLC, TAK

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5CKX \| pdb_00005ckx	Download File View File

Non-covalent complex of DAHP synthase and chorismate mutase from Mycobacterium tuberculosis with bound transition state analog and feedback effectors tyrosine and phenylalanine

Munack, S., Okvist, M., Krengel, U.

(2016) J Mol Biology 428: 1237-1255

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Intracellular chorismate mutase (protein) Phospho-2-dehydro-3-deoxyheptonate aldolase AroG (protein)
Unique Ligands	CL, GOL, MN, PHE, SO4, TSA, TYR

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5HUD \| pdb_00005hud	Download File View File

Non-covalent complex of and DAHP synthase and chorismate mutase from Corynebacterium glutamicum with bound transition state analog

Burschowsky, D., Heim, J.B., Thorbjoernsrud, H.V., Krengel, U.

(2018) Biochemistry 57: 557-573

Released	2017-08-02
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Corynebacterium glutamicum
Macromolecule	3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase (protein) Chorismate mutase (protein)
Unique Ligands	GOL, MN, PEG, PG4, PGE, PO4, TRP, TSA

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5J6F \| pdb_00005j6f	Download File View File

Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate

Nazmi, A.R., Othman, M., Lang, E.J.M., Bai, Y., Allison, T.M., Panjkar, S., Arcus, V.L., Parker, E.J.

(2016) J Biological Chem 291: 21836-21847

Released	2016-09-07
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Geobacillus sp. GHH01
Macromolecule	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, chorismate mutase-isozyme 3 (protein)
Unique Ligands	MN, PRE, SO4

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8G01 \| pdb_00008g01	Download File View File

YES Complex - E. coli MraY, Protein E ID21, E. coli SlyD

Orta, A.K., Clemons, W.M., Riera, N.

(2023) Science 381: eadg9091-eadg9091

Released	2023-07-26
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Escherichia coli K-12 Escherichia phage ID21
Macromolecule	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (protein) GPE (protein) Phospho-N-acetylmuramoyl-pentapeptide-transferase (protein)

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8G02 \| pdb_00008g02	Download File View File

YES Complex - E. coli MraY, Protein E PhiX174, E. coli SlyD

Orta, A.K., Clemons, W.M., Li, Y.E.

(2023) Science 381: eadg9091-eadg9091

Released	2023-07-26
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Escherichia coli K-12 Escherichia phage phiX174
Macromolecule	Lysis protein E (protein) Peptidyl-prolyl cis-trans isomerase (protein) Phospho-N-acetylmuramoyl-pentapeptide-transferase (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2W19 | pdb_00002w19

Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis

2W1A | pdb_00002w1a

Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis with bound tsa

3MDY | pdb_00003mdy

Crystal structure of the cytoplasmic domain of the bone morphogenetic protein receptor type-1B (BMPR1B) in complex with FKBP12 and LDN-193189

3NVT | pdb_00003nvt

1.95 Angstrom crystal structure of a bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase (aroA) from Listeria monocytogenes EGD-e

3TFC | pdb_00003tfc

1.95 Angstrom crystal structure of a bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase (aroA) from Listeria monocytogenes EGD-e in complex with phosphoenolpyruvate

4C02 | pdb_00004c02

Crystal structure of human ACVR1 (ALK2) in complex with FKBP12.6 and dorsomorphin

5CKX | pdb_00005ckx

Non-covalent complex of DAHP synthase and chorismate mutase from Mycobacterium tuberculosis with bound transition state analog and feedback effectors tyrosine and phenylalanine

5HUD | pdb_00005hud

Non-covalent complex of and DAHP synthase and chorismate mutase from Corynebacterium glutamicum with bound transition state analog

5J6F | pdb_00005j6f

Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate

8G01 | pdb_00008g01

YES Complex - E. coli MraY, Protein E ID21, E. coli SlyD

8G02 | pdb_00008g02

YES Complex - E. coli MraY, Protein E PhiX174, E. coli SlyD

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2W19 | pdb_00002w19

2W1A | pdb_00002w1a

3MDY | pdb_00003mdy

3NVT | pdb_00003nvt

3TFC | pdb_00003tfc

4C02 | pdb_00004c02

5CKX | pdb_00005ckx

5HUD | pdb_00005hud

5J6F | pdb_00005j6f

8G01 | pdb_00008g01

8G02 | pdb_00008g02