1KON

CRYSTAL STRUCTURE OF E.COLI YEBC

PDB DOI: https://doi.org/10.2210/pdb1KON/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Escherichia coli
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2001-12-21 Released: 2002-07-17
Deposition Author(s): Jia, J., Smith, C., Lunin, V.V., Matte, A., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free:
0.317 (Depositor)
R-Value Work:
0.273 (Depositor)
R-Value Observed:
0.273 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

UNPUBLISHED

To be published.

Macromolecule Content

Total Structure Weight: 26.74 kDa
Atom Count: 1,732
Modelled Residue Count: 233
Deposited Residue Count: 249
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein yebC	A	249	Escherichia coli	Mutation(s): 0 Gene Names: yebC
UniProt
Find proteins for P0A8A0 (Escherichia coli (strain K12)) Explore P0A8A0 Go to UniProtKB: P0A8A0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0A8A0
Sequence Annotations Expand
Reference Sequence LOADING

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.317 (Depositor)
R-Value Work: 0.273 (Depositor)
R-Value Observed: 0.273 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 39.56	α = 90
b = 73.48	β = 97.89
c = 39.26	γ = 90

Software Package:

Software Name	Purpose
SOLVE	phasing
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2002-07-17

Deposition Author(s):

Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

Revision History (Full details and data files)

Version 1.0: 2002-07-17
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2018-01-31
Changes: Experimental preparation
Version 1.4: 2024-02-14
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.