1OT0

Structure of Antimicrobial Peptide, HP (2-20) and its Analogues Derived from Helicobacter pylori, as Determined by 1H NMR Spectroscopy

• PDB DOI: https://doi.org/10.2210/pdb1OT0/pdb

• Classification: ANTIBIOTIC
• Organism(s): Helicobacter pylori
• Mutation(s): No 


• Deposited: 2003-03-21 Released: 2004-09-07 
• Deposition Author(s): Lee, K.H., Lee, D.G., Park, Y., Hahm, K.-S., Kim, Y.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 80 
• Conformers Submitted: 20 
• Selection Criteria: structures with acceptable covalent geometry 

Literature

Structure of Antimicrobial Peptide, HP (2-20) and its Analogues Derived from Helicobacter pylori, as Determined by 1H NMR Spectroscopy

Lee, K.H., Lee, D.G., Park, Y., Hahm, K.-S., Kim, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 2.4 kDa 
• Atom Count: 170 
• Modelled Residue Count: 20 
• Deposited Residue Count: 20 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L1	A	20	Helicobacter pylori	Mutation(s): 0
UniProt
Find proteins for P56029 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore P56029  Go to UniProtKB:  P56029

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 80 
• Conformers Submitted: 20 
• Selection Criteria: structures with acceptable covalent geometry 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-09-07 
Deposition Author(s): Lee, K.H., Lee, D.G., Park, Y., Hahm, K.-S., Kim, Y.

Revision History  

• Version 1.0: 2004-09-07
  Type: Initial release
  
• Version 1.1: 2008-04-29
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-11-20
  Changes: Data collection, Structure summary