1P0O

HP (2-20) substitution of Trp for Gln and Asp at position 17 and 19 MODIFICATION IN SDS-D25 MICELLES

• PDB DOI: https://doi.org/10.2210/pdb1P0O/pdb

• Classification: RIBOSOME
• Organism(s): Helicobacter pylori (strain ATCC 700392 / 26695)
• Mutation(s): Yes 


• Deposited: 2003-04-10 Released: 2003-05-20 
• Deposition Author(s): Lee, K.H., Lee, D.G., Park, Y.K., Harm, K.S., Kim, Y.M.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy

Lee, K.H., Lee, D.G., Park, Y.K., Harm, K.S., Kim, Y.M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 2.46 kDa 
• Atom Count: 175 
• Modelled Residue Count: 20 
• Deposited Residue Count: 20 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
19-mer peptide from 50S ribosomal protein L1	A	20	N/A	Mutation(s): 2
UniProt
Find proteins for P56029 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore P56029  Go to UniProtKB:  P56029

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-05-20 
Deposition Author(s): Lee, K.H., Lee, D.G., Park, Y.K., Harm, K.S., Kim, Y.M.

Revision History  

• Version 1.0: 2003-05-20
  Type: Initial release
  
• Version 1.1: 2008-04-29
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2021-11-10
  Changes: Data collection, Database references, Derived calculations, Experimental preparation
• Version 1.4: 2024-10-30
  Changes: Data collection, Structure summary