X-ray Structure of YDII_ECOLI Northeast Structural Genomics Consortium Target ER29
Kuzin, A.P., Edstrom, W., Vorobiev, S.M., Lee, I., Forouhar, F., Ma, L., Chiang, Y., Rong, X., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hypothetical protein ydiI | 144 | Escherichia coli | Mutation(s): 4 Gene Names: YDII, B1686 EC: 3.1.2.28 | ![]() | |
UniProt | |||||
Find proteins for P77781 (Escherichia coli (strain K12)) Explore P77781 Go to UniProtKB: P77781 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P77781 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | E [auth A], F [auth B], G [auth C], H [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.642 | α = 90 |
b = 61.196 | β = 104.66 |
c = 93.008 | γ = 90 |
Software Name | Purpose |
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CNS | refinement |
DENZO | data reduction |
CCP4 | data scaling |
MOLREP | phasing |