1VJK

Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001

• PDB DOI: https://doi.org/10.2210/pdb1VJK/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Pyrococcus furiosus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2004-03-10 Released: 2004-08-10 
• Deposition Author(s): Chen, L., Liu, Z.J., Tempel, W., Shah, A., Lee, D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.51 Å
• R-Value Free: 
  0.224 (Depositor), 0.250 (DCC) 
• R-Value Work: 
  0.210 (Depositor), 0.230 (DCC) 

Literature

Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001 '

Chen, L., Liu, Z.J., Tempel, W., Shah, A., Lee, D., Rose, J.P., ENEH, J.C., HOPKINS, R.C., JENNEY JR., F.E., LEE, H.S., Li, T., POOLE II, F.L., SHAH, C., SUGAR, F.J., ADAMS, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 11.2 kDa 
• Atom Count: 769 
• Modelled Residue Count: 88 
• Deposited Residue Count: 98 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
molybdopterin converting factor, subunit 1	A	98	Pyrococcus furiosus	Mutation(s): 0
UniProt
Find proteins for Q8U3C7 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U3C7  Go to UniProtKB:  Q8U3C7

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.51 Å
• R-Value Free:  0.224 (Depositor), 0.250 (DCC) 
• R-Value Work:  0.210 (Depositor), 0.230 (DCC) 

Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 81.467	α = 90
b = 81.467	β = 90
c = 63.698	γ = 120

Software Package:

Software Name	Purpose
SOLVE	phasing
RESOLVE	phasing
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
PDB_EXTRACT	data extraction
ARP/wARP	model building
XFIT	data reduction
MolProbity	model building

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-08-10 
Deposition Author(s): Chen, L., Liu, Z.J., Tempel, W., Shah, A., Lee, D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

Revision History  

• Version 1.0: 2004-08-10
  Type: Initial release
  
• Version 1.1: 2008-04-26
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Advisory, Version format compliance
• Version 1.3: 2017-10-04
  Changes: Refinement description
• Version 1.4: 2023-12-27
  Changes: Data collection, Database references