2AXP

X-Ray Crystal Structure of Protein BSU20280 from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR256.

PDB DOI: https://doi.org/10.2210/pdb2AXP/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Bacillus subtilis subsp. subtilis str. 168
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2005-09-05 Released: 2005-09-13
Deposition Author(s): Forouhar, F., Abashidze, M., Friedman, D., Vorobiev, S.M., Kuzin, A.P., Ciao, M., Conover, K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free:
0.288 (Depositor), 0.289 (DCC)
R-Value Work:
0.255 (Depositor), 0.265 (DCC)
R-Value Observed:
0.255 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Crystal Structure of the Hypothetical Protein BSU20280 from Bacillus subtilis, NESG target SR256

Forouhar, F., Abashidze, M., Friedman, D., Vorobiev, S.M., Kuzin, A.P., Ciao, M., Conover, K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F.

To be published.

Macromolecule Content

Total Structure Weight: 40.52 kDa
Atom Count: 2,861
Modelled Residue Count: 344
Deposited Residue Count: 346
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
hypothetical protein BSU20280	A, B	173	Bacillus subtilis subsp. subtilis str. 168	Mutation(s): 2 Gene Names: yorR
UniProt
Find proteins for O31896 (Bacillus subtilis (strain 168)) Explore O31896 Go to UniProtKB: O31896
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O31896
Sequence Annotations Expand
Reference Sequence LOADING

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.288 (Depositor), 0.289 (DCC)
R-Value Work: 0.255 (Depositor), 0.265 (DCC)
R-Value Observed: 0.255 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 90.847	α = 90
b = 99.944	β = 125.29
c = 78.344	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling
COMO	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2005-09-13

Deposition Author(s):

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2005-09-13
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance
Version 1.3: 2024-10-16
Changes: Data collection, Database references, Derived calculations, Structure summary

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.