2H4B | pdb_00002h4b

cis-4-aminomethylphenylazobenzoic acid-avian pancreatic polypeptide

PDB DOI: https://doi.org/10.2210/pdb2H4B/pdb
BMRB: 7233

Classification: DE NOVO PROTEIN
Organism(s): Meleagris gallopavo
Mutation(s): No

Deposited: 2006-05-24 Released: 2006-09-12
Deposition Author(s): Jurt, S., Aemissegger, A., Guentert, P., Zerbe, O., Hilvert, D.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2H4B

This is version 1.4 of the entry. See complete history.

Literature

A Photoswitchable Miniprotein Based on the Sequence of Avian Pancreatic Polypeptide

Jurt, S., Aemissegger, A., Guentert, P., Zerbe, O., Hilvert, D.

(2006) Angew Chem Int Ed Engl 45: 6297-6300

PubMed: 16933352 Search on PubMed
DOI: https://doi.org/10.1002/anie.200602084
Primary Citation Related Structures:
2H3S, 2H3T, 2H4B

Organizational Affiliation

Institute of Organic Chemistry, University of Zurich, 8057 Zurich, Switzerland.

Macromolecule Content

Total Structure Weight: 8.45 kDa
Atom Count: 598
Modeled Residue Count: 68
Deposited Residue Count: 68
Unique protein chains: 2

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pancreatic hormone	A, C [auth B]	9	N/A	Mutation(s): 0
UniProt
Find proteins for P68249 (Meleagris gallopavo) Explore P68249 Go to UniProtKB: P68249
Entity Groups
UniProt Group	P68249
Sequence Annotations Expand
Reference Sequence

Find similar proteins by: Sequence | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Pancreatic hormone	B [auth C], D	25	N/A	Mutation(s): 0
UniProt
Find proteins for P68249 (Meleagris gallopavo) Explore P68249 Go to UniProtKB: P68249
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P68249
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZAB Query on ZAB Download:Ideal Coordinates CCD File SDF format, chain F [auth B] SDF format, chain E [auth A] MOL2 format, chain F [auth B] MOL2 format, chain E [auth A] mmCIF format, chain F [auth B] mmCIF format, chain E [auth A]	E [auth A], F [auth B]	(3-{(Z)-[3-(AMINOMETHYL)PHENYL]DIAZENYL}PHENYL)ACETIC ACID C₁₅ H₁₅ N₃ O₂ RHNJRPYVLIXHAK-ZCXUNETKSA-N		Interactions Focus chain E [auth A] Focus chain F [auth B]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2006-09-12

Deposition Author(s):

Aemissegger, A.

Revision History (Full details and data files)

Version 1.0: 2006-09-12
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Database references, Derived calculations
Version 1.4: 2024-11-20
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.