2JR1 | pdb_00002jr1

Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.

PDB DOI: https://doi.org/10.2210/pdb2JR1/pdb
BMRB: 15314

Classification: DNA BINDING PROTEIN
Organism(s): Xylella fastidiosa 9a5c
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2007-06-18 Released: 2007-09-25
Deposition Author(s): Rosselli, L.K., Sforca, M.L., Souza, A.P., Zeri, A.C.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 20
Selection Criteria: structures with acceptable covalent geometry

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.

Rosselli, L.K., Sforca, M.L., Souza, A.P., Zeri, A.C.

To be published.

Macromolecule Content

Total Structure Weight: 8.85 kDa
Atom Count: 628
Modeled Residue Count: 79
Deposited Residue Count: 79
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Virulence regulator	A	79	Xylella fastidiosa 9a5c	Mutation(s): 0 Gene Names: XF0749
UniProt
Find proteins for Q9PFC9 (Xylella fastidiosa (strain 9a5c)) Explore Q9PFC9 Go to UniProtKB: Q9PFC9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9PFC9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 20
Selection Criteria: structures with acceptable covalent geometry

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-09-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2007-09-25
Type: Initial release
Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance
Version 1.2: 2024-05-01
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.