2MJ2

Structure of the dimerization domain of the human polyoma, JC virus agnoprotein is an amphipathic alpha-helix.

• PDB DOI: https://doi.org/10.2210/pdb2MJ2/pdb
• BMRB: 19702

• Classification: VIRAL PROTEIN
• Organism(s): JC polyomavirus
• Mutation(s): No 
• Membrane Protein: Yes  OPMPDBTM


• Deposited: 2013-12-23 Released: 2014-04-23 
• Deposition Author(s): Coric, P., Saribas, S.A., Abou-Gharbia, M., Childers, W., White, M., Bouaziz, S., Safak, M.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 17 
• Selection Criteria: structures with the lowest energy 

Literature

The structure of the dimerization domain of the human polyoma, JC virus agnoprotein is an amphipathic alpha-helix

Coric, P., Saribas, S.A., Abou-Gharbia, M., Childers, W., White, M., Bouaziz, S., Safak, M.

(2014) J Virol 

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 4.21 kDa 
• Atom Count: 296 
• Modelled Residue Count: 36 
• Deposited Residue Count: 36 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Agnoprotein	A	36	JC polyomavirus	Mutation(s): 0  Membrane Entity: Yes
UniProt
Find proteins for P03086 (JC polyomavirus) Explore P03086  Go to UniProtKB:  P03086

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 17 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-04-23 
Deposition Author(s): Coric, P., Saribas, S.A., Abou-Gharbia, M., Childers, W., White, M., Bouaziz, S., Safak, M.

Revision History  

• Version 1.0: 2014-04-23
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references