The crystal structure of a TetR transcription regulator from Silicibacter pomeroyi DSS
Tan, K., Li, H., Freeman, L., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transcription regulator, TetR family | 194 | Ruegeria pomeroyi | Mutation(s): 0  Gene Names: SPO1902 | ||
UniProt | |||||
Find proteins for Q5LS67 (Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)) Explore Q5LS67  Go to UniProtKB:  Q5LS67 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5LS67 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MES Query on MES | CA [auth E] GA [auth F] I [auth A] K [auth B] LA [auth G] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N | |||
EDO Query on EDO | AA [auth D] BA [auth D] DA [auth E] EA [auth E] FA [auth E] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F, G, H | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 60.523 | α = 89.35 |
b = 93.072 | β = 71.02 |
c = 93.397 | γ = 71.04 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
SHELXD | phasing |
MLPHARE | phasing |
DM | phasing |
RESOLVE | phasing |
HKL-3000 | phasing |