Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana
Shabalin, I.G., Polyakov, K.M., Skirgello, O.E., Tishkov, V.I., Popov, V.O.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Formate dehydrogenase | 351 | Arabidopsis thaliana | Mutation(s): 0 Gene Names: At5g14780, FDH, FDH1, T9L3_80 EC: 1.2.1.2 (PDB Primary Data), 1.17.1.9 (UniProt) | ![]() | |
UniProt | |||||
Find proteins for Q9S7E4 (Arabidopsis thaliana) Explore Q9S7E4 Go to UniProtKB: Q9S7E4 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9S7E4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD Query on NAD | BB [auth J] DB [auth K] FA [auth E] IA [auth F] JB [auth L] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
SO4 Query on SO4 | AA [auth D] FB [auth K] KA [auth F] O [auth A] OA [auth G] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | AB [auth I] BA [auth D] CA [auth D] DA [auth D] EA [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
AZI Query on AZI | CB [auth J] EB [auth K] GA [auth E] JA [auth F] KB [auth L] | AZIDE ION N3 IVRMZWNICZWHMI-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 229.62 | α = 90 |
b = 217.68 | β = 92.62 |
c = 139.11 | γ = 90 |
Software Name | Purpose |
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XSCALE | data scaling |
MOLREP | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
AUTOMAR | data collection |
XDS | data reduction |