5WCE | pdb_00005wce

Caulobacter crescentus pol III beta

PDB DOI: https://doi.org/10.2210/pdb5WCE/pdb

Classification: TRANSFERASE
Organism(s): Caulobacter vibrioides CB15
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2017-06-30 Released: 2017-07-26
Deposition Author(s): Oakley, A.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free:
0.226 (Depositor), 0.225 (DCC)
R-Value Work:
0.187 (Depositor)
R-Value Observed:
0.189 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Pol III beta from Caulobacter crescentus

Dawes, F., Oakley, A.J.

To be published.

Macromolecule Content

Total Structure Weight: 82.86 kDa
Atom Count: 6,185
Modeled Residue Count: 739
Deposited Residue Count: 758
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA polymerase III subunit beta	A, B	379	Caulobacter vibrioides CB15	Mutation(s): 0 Gene Names: dnaN, CC_0156 EC: 2.7.7.7
UniProt
Find proteins for P0CAU5 (Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)) Explore P0CAU5 Go to UniProtKB: P0CAU5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0CAU5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.226 (Depositor), 0.225 (DCC)
R-Value Work: 0.187 (Depositor)
R-Value Observed: 0.189 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 83.855	α = 90
b = 59.572	β = 92.89
c = 86.49	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
PHENIX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2017-07-26

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-07-26
Type: Initial release
Version 1.1: 2023-10-04
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.