Download MendeleyA hypothetical aminotransferase from Mycobacterium tuberculosis
Duan, L., Sacchettini, J.To be published.
6Q1Q
A hypothetical aminotransferase from Mycobacterium tuberculosis, apo form
- PDB DOI: https://doi.org/10.2210/pdb6Q1Q/pdb
- Classification: TRANSFERASE
- Organism(s): Mycobacterium tuberculosis H37Rv
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2019-08-05 Released: 2020-09-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.229
- R-Value Work: 0.195
- R-Value Observed: 0.196
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Probable amino acid aminotransferase | 291 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: Rv0812 EC: 4.1.3.38 (UniProt), 2.6.1.21 (UniProt) |  | |
UniProt | |||||
Find proteins for Q79FW0 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore Q79FW0 Go to UniProtKB: Q79FW0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q79FW0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CIT Query on CIT | C [auth A], D [auth A] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |  | ||
| EDO Query on EDO | E [auth A], F [auth A], G [auth A], H [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.229
- R-Value Work: 0.195
- R-Value Observed: 0.196
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.383 | α = 90 |
| b = 66.486 | β = 90.09 |
| c = 97.51 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2020-09-23 Deposition Author(s): Duan, L., Sacchettini, J.
Revision History (Full details and data files)
- Version 1.0: 2020-09-23
Type: Initial release - Version 1.1: 2023-10-11
Changes: Data collection, Database references, Refinement description
