7BQ9 | pdb_00007bq9

Crystal structure of ASFV p15

• PDB DOI: https://doi.org/10.2210/pdb7BQ9/pdb

• Classification: STRUCTURAL PROTEIN
• Organism(s): African swine fever virus
• Expression System: Drosophila melanogaster
• Mutation(s): No 


• Deposited: 2020-03-24 Released: 2020-06-24 
• Deposition Author(s): Fu, D., Chen, C., Guo, Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.61 Å
• R-Value Free: 
  0.218 (Depositor), 0.231 (DCC) 
• R-Value Work: 
  0.181 (Depositor), 0.196 (DCC) 
• R-Value Observed: 
  0.185 (Depositor) 

Literature

Structure of a bifunctional membrane-DNA binding protein, African swine fever virus p15

Fu, D., Guo, Y.

(2020) Protein Cell 

Biological Assembly 1  

Global Symmetry: Dihedral - D3  (Explore in 3D)
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 43.61 kDa 
• Atom Count: 2,408 
• Modeled Residue Count: 306 
• Deposited Residue Count: 388 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
60 kDa polyprotein	A [auth B], B [auth A]	194	African swine fever virus	Mutation(s): 0  Gene Names: CP530R
UniProt
Find proteins for Q65179 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore Q65179  Go to UniProtKB:  Q65179

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.61 Å
• R-Value Free:  0.218 (Depositor), 0.231 (DCC) 
• R-Value Work:  0.181 (Depositor), 0.196 (DCC) 
• R-Value Observed: 0.185 (Depositor) 

Space Group: P 2₁ 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 116.737	α = 90
b = 116.737	β = 90
c = 116.737	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-3000	data reduction
PHASER	phasing

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2020-06-24 
Deposition Author(s): Fu, D., Chen, C., Guo, Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31941011
National Natural Science Foundation of China (NSFC)	China	31670731
National Natural Science Foundation of China (NSFC)	China	31870733

Revision History  

• Version 1.0: 2020-06-24
  Type: Initial release
  
• Version 1.1: 2024-11-13
  Changes: Data collection, Database references, Structure summary