ARHGEF2 PanDDA analysis group deposition
Bradshaw, W.J., Katis, V.L., Bountra, C., von Delft, F., Brennan, P.E.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transforming protein RhoA | 185 | Homo sapiens | Mutation(s): 0  Gene Names: RHOA, ARH12, ARHA, RHO12 EC: 3.6.5.2 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61586 (Homo sapiens) Explore P61586  Go to UniProtKB:  P61586 | |||||
PHAROS:  P61586 GTEx:  ENSG00000067560  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61586 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Rho guanine nucleotide exchange factor 2 | 245 | Homo sapiens | Mutation(s): 0  Gene Names: ARHGEF2, KIAA0651, LFP40 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q92974 (Homo sapiens) Explore Q92974  Go to UniProtKB:  Q92974 | |||||
PHAROS:  Q92974 GTEx:  ENSG00000116584  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92974 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
WKY (Subject of Investigation/LOI) Query on WKY | C [auth A] | N-(3-methylpyridin-4-yl)acetamide C8 H10 N2 O DHUDCBCQKIWLSB-UHFFFAOYSA-N | |||
DMS Query on DMS | D [auth A], H [auth B], I [auth B], J [auth B], K [auth B] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
FMT Query on FMT | E [auth A] F [auth A] G [auth A] L [auth B] M [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 71.305 | α = 90 |
b = 71.305 | β = 90 |
c = 197.244 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute on Aging (NIH/NIA) | United States | 5U54AG065187-03 |