7PIZ

The structure of phosphoglucomutase from Candida albicans

• PDB DOI: https://doi.org/10.2210/pdb7PIZ/pdb

• Classification: ISOMERASE
• Organism(s): Candida albicans P75010
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2021-08-23 Released: 2022-09-07 
• Deposition Author(s): Yan, K., van Aalten, D.M.F.
• Funding Organization(s): Wellcome Trust, Medical Research Council (MRC, United Kingdom)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.259 
• R-Value Work: 0.196 
• R-Value Observed: 0.199 

Starting Model: experimental

Literature

Targeting an essential step in the biosynthetic pathway of uridine diphosphate glucose in Aspergillus fumigatus

Yan, K., Stanley, M., Kowalski, B., Raimi, O.G., Ferenbach, A.T., Wei, P., Yuan, H., Fang, W., van Aalten, D.M.F.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: homology

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 125.06 kDa 
• Atom Count: 9,970 
• Modelled Residue Count: 1,098 
• Deposited Residue Count: 1,130 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phosphoglucomutase	A [auth C], B	565	Candida albicans P75010	Mutation(s): 0  EC: 5.4.2.2
UniProt
Find proteins for A0A1D8PSA9 (Candida albicans (strain SC5314 / ATCC MYA-2876)) Explore A0A1D8PSA9  Go to UniProtKB:  A0A1D8PSA9

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	C, D [auth B], E [auth B], F [auth B], G [auth B]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.259 
• R-Value Work: 0.196 
• R-Value Observed: 0.199 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.95	α = 90
b = 86.841	β = 92.8
c = 109.92	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
Aimless	data scaling
PDB_EXTRACT	data extraction
iMOSFLM	data reduction
MOLREP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2022-09-07 
Deposition Author(s): Yan, K., van Aalten, D.M.F.

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Funding Organization	Location	Grant Number
Wellcome Trust	United Kingdom	200208/Z/15/Z
Medical Research Council (MRC, United Kingdom)	United Kingdom	V001094

Revision History  

• Version 1.0: 2022-09-07
  Type: Initial release
  
• Version 1.1: 2024-01-31
  Changes: Data collection, Refinement description