7TXT

Structure of human serotonin transporter bound to small molecule '8090 in lipid nanodisc and NaCl


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure of human serotonin transporter bound to small molecule '8090 in lipid nanodisc and NaCl

Singh, I.Seth, A.Billesboelle, C.B.Braz, J.Rodriguiz, R.M.Roy, K.Bekele, B.Craik, V.Huang, X.P.Boytsov, D.Lak, P.O'Donnell, H.Sandtner, W.Roth, B.L.Basbaum, A.I.Wetsel, W.C.Manglik, A.Shoichet, B.K.Rudnick, G.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
15B8 Fab heavy chainA [auth C]120Mus musculusMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
15B8 Fab light chainB [auth D]111Mus musculusMutation(s): 0 
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Sodium-dependent serotonin transporterC [auth S]541Homo sapiensMutation(s): 0 
Gene Names: SLC6A4HTTSERT
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P31645 (Homo sapiens)
Explore P31645 
Go to UniProtKB:  P31645
PHAROS:  P31645
GTEx:  ENSG00000108576 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP31645
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
KWC (Subject of Investigation/LOI)
Query on KWC

Download Ideal Coordinates CCD File 
D [auth S]1-[4-(4-fluorophenyl)-1,3-thiazol-2-yl]piperazine
C13 H14 F N3 S
DZOSNUNUESTDRS-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC3.2.0

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Defense (DOD, United States)United StatesHR0011-19-2-0020

Revision History  (Full details and data files)

  • Version 1.0: 2023-03-15
    Type: Initial release