Bovine Xanthine Oxidoreductase Crystallized with oxypurinol
Okamoto, K., Sekine, M.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Xanthine dehydrogenase/oxidase | 1,332 | Bos taurus | Mutation(s): 0  Gene Names: XDH EC: 1.17.1.4 (PDB Primary Data), 1.17.3.2 (PDB Primary Data) | ||
UniProt | |||||
Find proteins for P80457 (Bos taurus) Explore P80457  Go to UniProtKB:  P80457 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P80457 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 8 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FAD Query on FAD | G [auth A], R [auth B] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N | |||
MTE Query on MTE | E [auth A], P [auth B] | PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER C10 H14 N5 O6 P S2 HPEUEJRPDGMIMY-IFQPEPLCSA-N | |||
FES Query on FES | C [auth A], D [auth A], N [auth B], O [auth B] | FE2/S2 (INORGANIC) CLUSTER Fe2 S2 NIXDOXVAJZFRNF-UHFFFAOYSA-N | |||
MOS Query on MOS | F [auth A], Q [auth B] | DIOXOTHIOMOLYBDENUM(VI) ION H Mo O2 S BDSRWPHSAKXXRG-UHFFFAOYSA-M | |||
141 Query on 141 | K [auth A], V [auth B] | Oxypurinol C5 H4 N4 O2 HXNFUBHNUDHIGC-UHFFFAOYSA-N | |||
GOL Query on GOL | L [auth A] M [auth A] W [auth B] X [auth B] Y [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CO3 Query on CO3 | H [auth A], S [auth B] | CARBONATE ION C O3 BVKZGUZCCUSVTD-UHFFFAOYSA-L | |||
CA Query on CA | I [auth A], J [auth A], T [auth B], U [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 167.678 | α = 90 |
b = 123.47 | β = 90.89 |
c = 150.059 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
XDS | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Japan Science and Technology | Japan | 15H04702 |