Crystal structure of HLA-A*11:01 in complex with KRAS G12R peptide (VVVGARGVGK)
Xu, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HLA class I histocompatibility antigen, A alpha chain | 276 | Homo sapiens | Mutation(s): 3 Gene Names: HLA-A, HLAA | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04439 (Homo sapiens) Explore P04439 Go to UniProtKB: P04439 | |||||
PHAROS: P04439 GTEx: ENSG00000206503 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04439 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 122 | Homo sapiens | Mutation(s): 0 Gene Names: B2M, CDABP0092, HDCMA22P | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769 Go to UniProtKB: P61769 | |||||
PHAROS: P61769 GTEx: ENSG00000166710 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
KRAS G12V peptide (VVVGAVGVGK) | 10 | Homo sapiens | Mutation(s): 1 Gene Names: KRAS, KRAS2, RASK2 EC: 3.6.5.2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01116 (Homo sapiens) Explore P01116 Go to UniProtKB: P01116 | |||||
PHAROS: P01116 GTEx: ENSG00000133703 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01116 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 116.289 | α = 90 |
b = 121.845 | β = 90 |
c = 133.376 | γ = 90 |
Software Name | Purpose |
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PHENIX | phasing |
PHENIX | refinement |
Coot | model building |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Science and Technology (MoST, China) | China | 2021YFA1302200 |