8PWU

PfRH5 bound to monoclonal antibody MAD10-255

PDB DOI: https://doi.org/10.2210/pdb8PWU/pdb

Classification: CELL CYCLE
Organism(s): Plasmodium falciparum 3D7, Homo sapiens
Expression System: Drosophila melanogaster, Homo sapiens
Mutation(s): No

Deposited: 2023-07-21 Released: 2024-06-05
Deposition Author(s): Farrell, B., Higgins, M.K.
Funding Organization(s): Wellcome Trust

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.15 Å
R-Value Free: 0.264
R-Value Work: 0.242
R-Value Observed: 0.243

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

PfRH5 bound to monoclonal antibody MAD10-255

Farrell, B., Higgins, M.K.

To be published.

Macromolecule Content

Total Structure Weight: 380.51 kDa
Atom Count: 23,363
Modelled Residue Count: 2,848
Deposited Residue Count: 3,278
Unique protein chains: 2

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Reticulocyte-binding protein homolog 5	A, C, E, G, I A, C, E, G, I, K	338	Plasmodium falciparum 3D7	Mutation(s): 0 Gene Names: RH5, PFD1145c, PF3D7_0424100
UniProt
Find proteins for Q8IFM5 (Plasmodium falciparum (isolate 3D7)) Explore Q8IFM5 Go to UniProtKB: Q8IFM5
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q8IFM5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
monoclonal antibody MAD10-255	B, D, F, H, J	250	Homo sapiens	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.15 Å
R-Value Free: 0.264
R-Value Work: 0.242
R-Value Observed: 0.243
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 115.309	α = 90
b = 134.522	β = 93.56
c = 198.667	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
PDB_EXTRACT	data extraction
xia2	data reduction
xia2	data scaling
PHASER	phasing

Structure Validation

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Entry History & Funding Information

Deposition Data

Released Date: 2024-06-05

Deposition Author(s):

Funding Organization	Location	Grant Number
Wellcome Trust	United Kingdom	220797/Z/20/Z

Revision History (Full details and data files)

Version 1.0: 2024-06-05
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.