8RL0 | pdb_00008rl0

Crystal structure of a cysteine hydrolase from Ustilago maydis

PDB DOI: https://doi.org/10.2210/pdb8RL0/pdb

Classification: HYDROLASE
Organism(s): Mycosarcoma maydis
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2024-01-02 Released: 2025-01-15
Deposition Author(s): Altegoer, F., Christ, M., Bange, G.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.81 Å
R-Value Free:
0.258 (Depositor), 0.258 (DCC)
R-Value Work:
0.217 (Depositor), 0.217 (DCC)
R-Value Observed:
0.219 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history.

Literature

Structural and functional characterization of an isochorismate (ISC)-like protein in a plant-pathogenic fungus

Rubio Elizalde, I., Christ, M., Weiland, P., Jalomo, E., Voll, L., Altegoer, F., Bange, G.

To be published.

Macromolecule Content

Total Structure Weight: 24.24 kDa
Atom Count: 1,614
Modeled Residue Count: 204
Deposited Residue Count: 220
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Isochorismatase-like domain-containing protein	A	220	Mycosarcoma maydis	Mutation(s): 0 Gene Names: UMAG_12021
UniProt
Find proteins for A0A0D1DWT4 (Mycosarcoma maydis) Explore A0A0D1DWT4 Go to UniProtKB: A0A0D1DWT4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A0D1DWT4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.81 Å
R-Value Free: 0.258 (Depositor), 0.258 (DCC)
R-Value Work: 0.217 (Depositor), 0.217 (DCC)
R-Value Observed: 0.219 (Depositor)

Space Group: P 4 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 94.25	α = 90
b = 94.25	β = 90
c = 40.03	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-01-15

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded	Germany	--

Revision History (Full details and data files)

Version 1.0: 2025-01-15
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.