EasyGrid: A versatile platform for automated cryo-EM sample preparation and quality control
Gemin, O., Armijo, V., Papp, G.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Sodium pumping rhodopsin | 280 | Dokdonia eikasta | Mutation(s): 0 Gene Names: NaR | ![]() | |
UniProt | |||||
Find proteins for N0DKS8 (Dokdonia eikasta) Explore N0DKS8 Go to UniProtKB: N0DKS8 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | N0DKS8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
OLC Query on OLC | F [auth A], GB [auth D], MA [auth C], RA [auth C], X [auth B] | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate C21 H40 O4 RZRNAYUHWVFMIP-GDCKJWNLSA-N | |||
RET (Subject of Investigation/LOI) Query on RET | AC [auth E], H [auth A], HB [auth D], OA [auth C], Y [auth B] | RETINAL C20 H28 O NCYCYZXNIZJOKI-OVSJKPMPSA-N | |||
LFA Query on LFA | AB [auth C] BA [auth B] BB [auth C] CA [auth B] CB [auth C] | EICOSANE C20 H42 CBFCDTFDPHXCNY-UHFFFAOYSA-N | |||
OLA Query on OLA | EB [auth D], EC [auth E], J [auth A], V [auth B] | OLEIC ACID C18 H34 O2 ZQPPMHVWECSIRJ-KTKRTIGZSA-N | |||
NA (Subject of Investigation/LOI) Query on NA | AA [auth B], BC [auth E], I [auth A], IB [auth D], PA [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | cryoSPARC | 4.2 |
Funding Organization | Location | Grant Number |
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EIPOD fellowship under Marie Sklodowska-Curie Actions COFUND | Germany | 847543 |