9A07 | pdb_00009a07

Integrative Modeling of a Sin3/HDAC Complex Sub-structure

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.

• PDB DOI: https://doi.org/10.2210/pdb9A07/pdb

• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2019-02-28 Released: 2020-03-11 
• Deposition Author(s): Banks CAS, Zhang Y, Miah S, Hao Y, Adams MK, Wen Z, Thornton JL, Florens L, Washburn MP

---

Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: No 
• Ordered-State: No 
• Deposited Models: 1 
• Representative Model: 1 

Literature

Integrative Modeling of a Sin3/HDAC Complex Sub-structure

Banks CAS, Zhang Y, Miah S, Hao Y, Adams MK, Wen Z, Thornton JL, Florens L, Washburn MP

(2020) Cell Rep 

• DOI: https://doi.org/10.2139/ssrn.3491230

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 4-mer - A1B1C1D1 

Macromolecule Content 

• Total Structure Weight: 75.34 kDa 
• Atom Count: 5,290 
• Modeled Residue Count: 649 
• Deposited Residue Count: 649 
• Unique protein chains: 4

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
SAP30L C terminal	A	90	Homo sapiens	Mutation(s): 0  Gene Names: SAP30L
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HAJ7 (Homo sapiens) Explore Q9HAJ7  Go to UniProtKB:  Q9HAJ7
PHAROS:  Q9HAJ7 GTEx:  ENSG00000164576

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
SAP30L N terminal	B	68	Homo sapiens	Mutation(s): 0  Gene Names: SAP30L
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HAJ7 (Homo sapiens) Explore Q9HAJ7  Go to UniProtKB:  Q9HAJ7
PHAROS:  Q9HAJ7 GTEx:  ENSG00000164576

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
SIN3A	C	122	Homo sapiens	Mutation(s): 0  Gene Names: SIN3A
UniProt & NIH Common Fund Data Resources
Find proteins for Q96ST3 (Homo sapiens) Explore Q96ST3  Go to UniProtKB:  Q96ST3
PHAROS:  Q96ST3 GTEx:  ENSG00000169375

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
HDAC1	D	369	Homo sapiens	Mutation(s): 0  Gene Names: HDAC1 EC: 3.5.1 (UniProt), 3.5.1.98 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q13547 (Homo sapiens) Explore Q13547  Go to UniProtKB:  Q13547
PHAROS:  Q13547 GTEx:  ENSG00000116478

Experimental Data & Validation

Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: No 
• Ordered-State: No 
• Deposited Models: 1 
• Representative Model: 1 

Structure Validation

View Full Validation Report

View Summary Validation Report

Entry History 

Deposition Data

• Released Date: 2020-03-11 
Deposition Author(s): Banks CAS, Zhang Y, Miah S, Hao Y, Adams MK, Wen Z, Thornton JL, Florens L, Washburn MP

Revision History  

• Version 1.0: 2020-03-11
  Type: Initial release