Download MendeleyCooperativity of sheath proteins in the flagellar assembly of Leptospira spirochete
Kawamoto, A., Kuribayashi, T., Morita, M., Nakamura, S., Koizumi, N.To be published.
9LRY | pdb_00009lry
Straight and symmetrical filament of the spirochete periplasmic flagella of Leptospira biflexa
- PDB DOI: https://doi.org/10.2210/pdb9LRY/pdb
- EM Map EMD-63347: EMDB EMDataResource
- Classification: MOTOR PROTEIN
- Organism(s): Leptospira biflexa
- Mutation(s): No
- Deposited: 2025-02-02 Released: 2025-12-24
- Funding Organization(s): Japan Society for the Promotion of Science (JSPS), Japan Science and Technology
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.30 Å
- Aggregation State: FILAMENT
- Reconstruction Method: HELICAL
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Flagellin | 282 | Leptospira biflexa | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Bacterial flagellar sheath protein | B [auth C] | 277 | Leptospira biflexa | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for B0SR03 (Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)) Explore B0SR03 Go to UniProtKB: B0SR03 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B0SR03 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Bacterial flagellar sheath protein | C [auth B] | 300 | Leptospira biflexa | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.30 Å
- Aggregation State: FILAMENT
- Reconstruction Method: HELICAL
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION | 3.1.3 |
| MODEL REFINEMENT | PHENIX | 1.21.1_5286 |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-12-24 Deposition Author(s): Kawamoto, A., Nakamura, S., Koizumi, N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Japan Society for the Promotion of Science (JSPS) | Japan | 24K02274 |
| Japan Science and Technology | Japan | JPMJPR21E5 |
Revision History (Full details and data files)
- Version 1.0: 2025-12-24
Type: Initial release
