9MQ4

Damaged 70S ribosome with PrfH bound

• PDB DOI: https://doi.org/10.2210/pdb9MQ4/pdb
• NAKB: 9MQ4
• EM Map EMD-48513: EMDB EMDataResource

• Classification: RIBOSOME
• Organism(s): Escherichia coli, Escherichia coli 0.1197
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2025-01-01 Released: 2025-02-05 
• Deposition Author(s): Tian, Y., Li, Q., Jin, H., Fatma, S., Zeng, F., Huang, R.H.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.78 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Molecular and structural basis of a subfamily of PrfH rescuing both the damaged and intact ribosomes stalled in translation.

Tian, Y., Li, Q., Fatma, S., Jiang, J., Jin, H., Zeng, F., Huang, R.H.

(2025) bioRxiv 

• PubMed: 39829893 
• DOI: https://doi.org/10.1101/2025.01.09.632186
• Primary Citation of Related Structures:  
  9MOR, 9MQ4


• PubMed Abstract: 
  

  In bacteria, spontaneous mRNAs degradation and ribotoxin-induced RNA damage are two main biological events that lead to the stall of protein translation. The ubiquitous trans-translation system as well as several alternative rescue factors (Arfs) are responsible for rescuing the stalled ribosomes caused by truncated mRNAs that lack the stop codons. To date, protein release factor homolog (PrfH) is the only factor known to rescue the stalled ribosome damaged by ribotoxins. Here we show that a subfamily of PrfH, exemplified by PrfH from Capnocytophaga gingivalis ( Cg PrfH), rescues both types of stalled ribosomes described above. Our in vitro biochemical assays demonstrate that Cg PrfH hydrolyzes the peptides attached to P-site tRNAs when in complex with both the damaged and intact ribosomes. Two cryo-EM structures of Cg PrfH in complex with the damaged and intact 70S ribosomes revealed that Cg PrfH employs two different regions of the protein to recognize two different stalled ribosomes to orient the GGQ motif for peptide hydrolysis. Thus, using a combination of bioinformatic, biochemical, and structural characterization described here, we have uncovered a family of ribosome rescue factors that possesses dual activities to resolve two distinct stalled protein translation in bacteria.

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Organizational Affiliation: 

Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 52-mer - A1B1C1D1E1F1G1H1I1J1K1L1M1N1O1P1Q1R1S1T1U1V1W1X1Y1Z1a1b1c1d1e1f1g1h1i1j1k1l1m1n1o1p1q1r1s1t1u1v1w1x1y1z1 Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 52-mer - A2B1C1D1E1F1G1H1I1J1K1L1M1N1O1P1Q1R1S1T1U1V1W1X1Y1Z1a1b1c1d1e1f1g1h1i1j1k1l1m1n1o1p1q1r1s1t1u1v1w1x1y1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 2,265.3 kDa 
• Atom Count: 150,154 
• Modelled Residue Count: 10,918 
• Deposited Residue Count: 11,187 
• Unique protein chains: 52
• Unique nucleic acid chains: 5

Macromolecules

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
Peptide chain release factor H	G [auth A]	231	Escherichia coli	Mutation(s): 0
UniProt
Find proteins for F0IC05 (Capnocytophaga sp. oral taxon 338 str. F0234) Explore F0IC05  Go to UniProtKB:  F0IC05

Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L2	H [auth B]	273	Escherichia coli	Mutation(s): 0  Gene Names: rplB, b3317, JW3279
UniProt
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422  Go to UniProtKB:  P60422

Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L3	I [auth C]	209	Escherichia coli	Mutation(s): 0  Gene Names: rplC, b3320, JW3282
UniProt
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438  Go to UniProtKB:  P60438

Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL4	J [auth D]	201	Escherichia coli	Mutation(s): 0  Gene Names: rplD, eryA, b3319, JW3281
UniProt
Find proteins for P60723 (Escherichia coli (strain K12)) Explore P60723  Go to UniProtKB:  P60723

Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL5	K [auth E]	179	Escherichia coli	Mutation(s): 0  Gene Names: rplE, b3308, JW3270
UniProt
Find proteins for P62399 (Escherichia coli (strain K12)) Explore P62399  Go to UniProtKB:  P62399

Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL6	L [auth F]	177	Escherichia coli	Mutation(s): 0  Gene Names: rplF, b3305, JW3267
UniProt
Find proteins for P0AG55 (Escherichia coli (strain K12)) Explore P0AG55  Go to UniProtKB:  P0AG55

Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL9	M [auth G]	149	Escherichia coli	Mutation(s): 0  Gene Names: rplI, b4203, JW4161
UniProt
Find proteins for P0A7R1 (Escherichia coli (strain K12)) Explore P0A7R1  Go to UniProtKB:  P0A7R1

Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L10	N [auth H]	165	Escherichia coli	Mutation(s): 0  Gene Names: rplJ, b3985, JW3948
UniProt
Find proteins for P0A7J3 (Escherichia coli (strain K12)) Explore P0A7J3  Go to UniProtKB:  P0A7J3

Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L11	O [auth I]	142	Escherichia coli	Mutation(s): 0  Gene Names: rplK, relC, b3983, JW3946
UniProt
Find proteins for P0A7J7 (Escherichia coli (strain K12)) Explore P0A7J7  Go to UniProtKB:  P0A7J7

Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL13	P [auth J]	142	Escherichia coli	Mutation(s): 0  Gene Names: rplM, b3231, JW3200
UniProt
Find proteins for P0AA10 (Escherichia coli (strain K12)) Explore P0AA10  Go to UniProtKB:  P0AA10

Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL14	Q [auth K]	123	Escherichia coli	Mutation(s): 0  Gene Names: rplN, b3310, JW3272
UniProt
Find proteins for P0ADY3 (Escherichia coli (strain K12)) Explore P0ADY3  Go to UniProtKB:  P0ADY3

Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL15	R [auth L]	144	Escherichia coli	Mutation(s): 0  Gene Names: rplO, b3301, JW3263
UniProt
Find proteins for P02413 (Escherichia coli (strain K12)) Explore P02413  Go to UniProtKB:  P02413

Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L16	S [auth M]	136	Escherichia coli	Mutation(s): 0  Gene Names: rplP, b3313, JW3275
UniProt
Find proteins for P0ADY7 (Escherichia coli (strain K12)) Explore P0ADY7  Go to UniProtKB:  P0ADY7

Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL17	T [auth N]	127	Escherichia coli	Mutation(s): 0  Gene Names: rplQ, b3294, JW3256
UniProt
Find proteins for P0AG44 (Escherichia coli (strain K12)) Explore P0AG44  Go to UniProtKB:  P0AG44

Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL18	U [auth O]	117	Escherichia coli	Mutation(s): 0  Gene Names: rplR, b3304, JW3266
UniProt
Find proteins for P0C018 (Escherichia coli (strain K12)) Explore P0C018  Go to UniProtKB:  P0C018

Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL19	V [auth P]	115	Escherichia coli	Mutation(s): 0  Gene Names: rplS
UniProt
Find proteins for P0A7K6 (Escherichia coli (strain K12)) Explore P0A7K6  Go to UniProtKB:  P0A7K6

Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L20	W [auth Q]	118	Escherichia coli	Mutation(s): 0  Gene Names: rplT
UniProt
Find proteins for P0A7L3 (Escherichia coli (strain K12)) Explore P0A7L3  Go to UniProtKB:  P0A7L3

Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL21	X [auth R]	103	Escherichia coli	Mutation(s): 0  Gene Names: rplU, UTI89_C3620
UniProt
Find proteins for P0AG48 (Escherichia coli (strain K12)) Explore P0AG48  Go to UniProtKB:  P0AG48

Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL22	Y [auth S]	110	Escherichia coli	Mutation(s): 0  Gene Names: rplV, UTI89_C3767
UniProt
Find proteins for P61175 (Escherichia coli (strain K12)) Explore P61175  Go to UniProtKB:  P61175

Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L23	Z [auth T]	100	Escherichia coli	Mutation(s): 0  Gene Names:  rplW, rplW_1, A5U30_004552, A8502_004023, A9X72_02185, ACN81_25520, ACU57_20960, AM464_09220, AW118_24900, AWP47_12645, B6R15_004069, B6R31_004968, BANRA_04328, BCB93_004293, BER14_25190, BF481_004930, BG944_001133, BGM66_003593, BJI68_08675, BJJ90_02125, BK292_20505, BK383_24645, BKL28_004543, BTB68_004356, BTQ06_10690, BvCmsKKP061_03030, BvCmsSIP010_02685, BXT93_05475, C0P57_002668, C1Q91_004904, C2121_004162, C2M16_25405, C2R31_004633, C3F40_19720, C9E67_02725, C9Z68_22635, CA593_09650, CF22_004849, CG692_20185, CG704_20870, CG831_003649, CIG67_10675, CQ986_004881, CR538_02420, CR539_21900, CR628_001366, CTR35_003630, CV83915_02780, CY655_21320, D1912_09370, D3C88_31150, D3G36_23050, D4M65_20655, D4N09_20255, D9D43_22550, D9E49_05240, D9J61_16735, DD762_23630, DIV22_15175, DNQ45_03840, DNX30_25395, DQ87_004776, DS732_24345, DTL43_20915, DU321_12085, E4K51_21575, E5H86_24440, E6D34_21675, EAI46_07560, EC95NR1_02709, ECs4183, EEP55_004492, EIA08_24040, EIZ93_12385, EN85_004349, EPS76_07130, EPS97_20010, EWK56_25080, ExPECSC038_03640, F7F11_22640, F7N46_23925, F9407_19210, F9413_21150, F9461_25570, F9B07_24600, FEJ01_22430, FIJ20_21110, FJQ40_18390, FKO60_25720, FOI11_019175, FOI11_04005, FPI65_20390, FPS11_25345, FTV92_20630, FV293_22380, FVB16_04955, FWK02_12650, FZN31_02550, FZU14_21905, G3V95_19930, G3W53_21040, G4A38_21595, G4A47_20865, G5603_24670, G8C01_22470, G9448_16990, GAI89_24745, GAJ12_24635, GGB84_004451, GJ11_21470, GKF66_21630, GNW61_16715, GOP25_22790, GP711_23390, GP954_00860, GP965_04380, GP975_01270, GP979_01920, GQA06_03865, GQM04_10650, GQM13_25285, GQM21_11315, GQN34_23350, GQW07_21465, GRO95_20730, GRW05_09145, GRW24_04670, GRW56_00380, GRW57_03455, GTP92_23110, GUC01_21265, H0O72_19500, HCQ42_003932, HEP30_018720, HEP34_004754, HHH44_004519, HI055_004156, HIE29_005203, HJQ60_004995, HLX92_09990, HLZ50_22095, HMV95_19690, HV109_02105, HV146_21755, HV209_14630, HVW04_17450, HVW43_18585, HVY77_02090, HVZ29_19180, HX086_19490, HX136_02110, I0E88_004501, I6H00_20840, I6H02_12075, IFB95_004822, IUC12_004844, J0541_004413, J5U05_004071, JNP96_25390, KV259_004342, KV317_004314, KV371_004328, KV406_004321, KV449_004356, KV455_004319, KV463_004341, KV469_004334, KV499_004405, KV500_004292, NCTC10082_02823, NCTC10089_00486, NCTC10090_03511, NCTC10418_00674, NCTC10429_01077, NCTC10764_03847, NCTC10767_01500, NCTC10865_00642, NCTC10974_00533, NCTC11112_01052, NCTC11124_04730, NCTC11126_02754, NCTC11181_02722, NCTC11341_01905, NCTC12950_00463, NCTC13148_03456, NCTC4450_02459, NCTC7927_00535, NCTC7928_02533, NCTC8009_01493, NCTC8179_05925, NCTC8333_00473, NCTC8500_00318, NCTC8621_00492, NCTC8622_00522, NCTC8959_03277, NCTC8960_03054, NCTC8985_04965, NCTC9001_04236, NCTC9044_01376, NCTC9045_00549, NCTC9073_00398, NCTC9075_00708, NCTC9081_00901, NCTC9117_00740, NCTC9702_00521, NCTC9706_02721, NCTC9962_06781, NEP60_26375, O5851_12245, RG28_21695, SAMEA3752557_01968, TUM18780_04200
UniProt
Find proteins for P0ADZ0 (Escherichia coli (strain K12)) Explore P0ADZ0  Go to UniProtKB:  P0ADZ0

Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L24	AA [auth U]	104	Escherichia coli	Mutation(s): 0  Gene Names:  rplX, A8502_004032, A9X72_02230, ACN81_25475, ACU57_21005, AM464_09175, AW118_24855, AWP47_12690, B6R15_004078, B6R31_004977, BANRA_04319, BCB93_004284, BER14_25145, BF481_004939, BG944_001124, BGM66_003602, BJI68_08720, BJJ90_02170, BK292_20460, BK383_24690, BKL28_004552, BTB68_004365, BTQ06_10645, BvCmsKKP061_03021, BvCmsSIP010_02676, BXT93_05520, C0P57_002659, C1Q91_004913, C2121_004171, C2M16_25450, C2R31_004624, C3F40_19765, C9E67_02770, C9Z68_22590, CA593_09695, CF22_004858, CG704_20915, CG831_003640, CIG67_10720, CQ986_004890, CR538_02465, CR539_21855, CR628_001357, CTR35_003621, CV83915_02789, CY655_21275, D4M65_20610, D9D43_22595, DD762_23585, DIV22_15220, DNQ45_03795, DNX30_25440, DQ87_004785, DS732_24300, DTL43_20960, DU321_12040, E4K51_21530, E5H86_24485, E6D34_21720, EAI46_07515, EC95NR1_02700, ECs4174, EEP55_004501, EIA08_23995, EIZ93_12430, EN85_004358, EPS97_20055, ExPECSC038_03649, F7F11_22685, F7N46_23970, F9407_19255, F9413_21195, F9461_25615, F9B07_24645, FEJ01_22475, FIJ20_21155, FJQ40_18345, FKO60_25675, FOI11_019220, FOI11_03960, FPS11_25390, FTV92_20675, FTV93_20860, FV293_22425, FVB16_04910, FWK02_06310, FZN31_02595, FZU14_21860, G3V95_19885, G4A38_21550, G4A47_20820, G5603_24625, G8C01_22515, G9448_17035, GAI89_24790, GAJ12_24680, GJ11_21425, GKF66_21585, GNW61_16670, GOP25_22745, GP954_00905, GP965_04335, GP975_01225, GP979_01965, GQA06_03910, GQM04_10605, GQM13_25240, GQM21_11270, GQW07_21510, GRO95_20775, GRW05_09100, GRW24_04715, GRW56_00335, GRW57_03500, GTP92_23155, GUC01_21220, H0O72_19455, HCQ42_003941, HEP30_018675, HEP34_004763, HHH44_004528, HI055_004147, HJQ60_005004, HLX92_10035, HLZ50_22140, HMV95_19645, HV109_02150, HV146_21710, HV209_14675, HVW04_17495, HVW43_18630, HVY77_02135, HVZ29_19135, HX086_19445, HX136_02155, I0E88_004510, I6H00_20885, I6H02_12030, IUC12_004853, J0541_004404, J5U05_004080, JNP96_25345, KV259_004351, KV317_004323, KV371_004337, KV406_004330, KV449_004365, KV455_004328, KV463_004350, KV469_004343, KV499_004414, KV500_004301, NCTC10082_02832, NCTC10418_00684, NCTC10764_03856, NCTC10865_00652, NCTC10974_00542, NCTC11124_04721, NCTC11181_02731, NCTC11341_01896, NCTC12950_00472, NCTC7922_04049, NCTC7927_00544, NCTC8009_01504, NCTC8179_05935, NCTC8333_00482, NCTC8500_00327, NCTC8621_00501, NCTC8622_00513, NCTC8960_03063, NCTC8985_04975, NCTC9044_01365, NCTC9045_00558, NCTC9077_00597, NCTC9117_00749, NCTC9702_00530, NCTC9706_02730, NEP60_26330, O5851_12290, RG28_21650, SAMEA3752557_01959, TUM18780_04290, WR15_19645
UniProt
Find proteins for P60624 (Escherichia coli (strain K12)) Explore P60624  Go to UniProtKB:  P60624

Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL25	BA [auth V]	94	Escherichia coli	Mutation(s): 0  Gene Names: rplY
UniProt
Find proteins for P68919 (Escherichia coli (strain K12)) Explore P68919  Go to UniProtKB:  P68919

Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL27	CA [auth W]	85	Escherichia coli	Mutation(s): 0  Gene Names: rpmA
UniProt
Find proteins for P0A7L8 (Escherichia coli (strain K12)) Explore P0A7L8  Go to UniProtKB:  P0A7L8

Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L28	DA [auth X]	78	Escherichia coli	Mutation(s): 0  Gene Names: rpmB, ECVG_03476
UniProt
Find proteins for P0A7M2 (Escherichia coli (strain K12)) Explore P0A7M2  Go to UniProtKB:  P0A7M2

Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein uL29	EA [auth Y]	63	Escherichia coli	Mutation(s): 0  Gene Names:  rpmC, A5U30_004546, A8502_004029, ACN81_25490, ACU57_20990, AW118_24870, AWP47_12675, B6R15_004075, B6R31_004974, BANRA_01943, BANRA_04322, BE932_15505, BER14_25160, BG944_001127, BGM66_003599, BGZ_02596, BGZ_04119, BJI68_08705, BK292_20475, BK383_24675, BKL28_004549, BTB68_004362, BTQ06_10660, BvCmsKKP061_03024, BvCmsSIP010_02679, BXT93_05505, C0P57_002662, C1Q91_004910, C2121_004168, C2M16_25435, C2R31_004627, C3F40_19750, C9Z68_22605, CF22_004855, CG704_20900, CG831_003643, CIG67_10705, CTR35_003624, CV83915_02786, D3G36_23080, D4M65_20625, D4N09_20225, D9D43_22580, D9E49_05210, D9J61_16705, DD762_23600, DIV22_15205, DNQ45_03810, DNX30_25425, DS732_24315, DTL43_20945, DU321_12055, E4K51_21545, E5H86_24470, E6D34_21705, EAI46_07530, ECs4177, EIA08_24010, EIMP300_17750, EIZ93_12415, EN85_004355, EPS76_07160, EPS97_20040, EWK56_25050, ExPECSC038_03646, F7F11_22670, F7N46_23955, F9413_21180, F9461_25600, F9B07_24630, FGAF848_25910, FIJ20_21140, FJQ40_18360, FKO60_25690, FOI11_019205, FOI11_03975, FORC44_0486, FPI65_20360, FPS11_25375, FTV93_20845, FVB16_04925, FWK02_06325, FZU14_21875, G3V95_19900, G3W53_21010, G4A38_21565, G4A47_20835, G5603_24640, GAI89_24775, GAJ12_24665, GKF66_21600, GNW61_16685, GOP25_22760, GP711_23360, GP954_00890, GP965_04350, GP975_01240, GP979_01950, GQA06_03895, GQE86_20135, GQM04_10620, GQM13_25255, GQM21_11285, GQN34_23320, GQW07_21495, GRC73_21695, GRO95_20760, GRW05_09115, GRW24_04700, GRW56_00350, GRW57_03485, GUC01_21235, H0O72_19470, HEP30_018690, HEP34_004760, HHH44_004525, HI055_004150, HIE29_005197, HJQ60_005001, HLX92_10020, HLZ50_22125, HMV95_19660, HV109_02135, HV209_14660, HVV39_09320, HVW04_17480, HVW43_18615, HVY77_02120, I6H00_20870, I6H02_12045, IFB95_004816, J0541_004407, J5U05_004077, JNP96_25360, KV499_004411, NCTC10082_02829, NCTC10089_00492, NCTC10418_00681, NCTC10429_01084, NCTC10764_03853, NCTC10767_01506, NCTC10865_00649, NCTC10974_00539, NCTC11126_02760, NCTC11181_02728, NCTC11341_01899, NCTC7922_04052, NCTC7927_00541, NCTC7928_02527, NCTC8009_01501, NCTC8179_05932, NCTC8333_00479, NCTC8500_00324, NCTC8621_00498, NCTC8622_00516, NCTC8959_03271, NCTC8960_03060, NCTC8985_04972, NCTC9001_04244, NCTC9044_01368, NCTC9045_00555, NCTC9075_00714, NCTC9077_00594, NCTC9081_00907, NCTC9117_00746, NCTC9702_00527, NCTC9706_02727, NCTC9962_06787, NEP60_26345, OGM49_22385, QDW62_02140, RZR61_12945, SAMEA3472112_00683, SAMEA3752557_01962, WR15_19660
UniProt
Find proteins for P0A7M6 (Escherichia coli (strain K12)) Explore P0A7M6  Go to UniProtKB:  P0A7M6

Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L30	FA [auth Z]	59	Escherichia coli	Mutation(s): 0  Gene Names:  rpmD, A5U30_004536, A6592_25715, A8499_003316, A8502_004039, A9X72_02265, AC065_15925, ACN81_25440, ACU57_21040, AM464_09140, APX88_16155, AW118_24820, AWP47_12725, B6R12_002823, B6R15_004085, B6R17_004958, B6R31_004984, B6R48_005051, B6R87_004961, BANRA_04312, BB540_01660, BER14_25110, BF481_004946, BG944_001117, BGM66_003609, BHS81_19755, BJI68_08755, BJJ90_02205, BK292_20425, BK383_24725, BKL28_004559, BMT50_12295, BMT91_19990, BR158_003774, BTB68_004372, BTQ06_10610, BUO55_004713, BvCmsKKP061_03014, BvCmsSIP010_02669, BXT93_05555, BZL69_25950, C0P57_002652, C1Q91_004920, C2121_004178, C2M16_25485, C2R31_004617, C3F40_19800, C5N07_23570, C9E67_02805, C9Z68_22555, CA593_09730, CCS08_00135, CCU84_002918, CDL36_25590, CF22_004865, CG692_20265, CG704_20950, CG831_003633, CIG67_10755, CQ986_004897, CQB02_00630, CR538_02500, CR539_21820, CR628_001350, CRM83_22925, CTR35_003614, CV83915_02796, CWS33_24860, CX938_003815, CY655_21240, D1912_11425, D3G36_23130, D4M65_20575, D4N09_20175, D6T60_05695, D9D43_22630, D9E34_23605, D9E49_05160, D9H94_20830, D9J03_20055, D9J61_16655, DD762_23550, DIV22_15255, DNQ45_03760, DNX30_25475, DS732_24265, DTL43_20995, DTL90_24695, DTM45_24550, DU321_12005, E0I52_20145, E4K51_21495, E5H86_24520, E6D34_21755, EA239_22795, EAI46_07480, EB534_RS01705, EC95NR1_02693, ECs4167, EIA08_23960, EIZ93_12465, EN85_004365, EPS76_07210, EPS97_20090, ERS085406_04406, ERS139208_04354, EWK56_25000, ExPECSC038_03656, F3P10_05565, F7F11_22720, F7N46_24005, F9413_21230, F9461_25650, F9B07_24680, FA868_22750, FEJ01_22510, FFF58_25450, FGG80_25130, FHD44_21270, FHQ97_20115, FIJ20_21190, FJQ40_18310, FKO60_25640, FN993_004711, FOI11_019255, FOI11_03925, FPI65_20310, FPS11_25425, FTV92_20710, FTV93_20895, FV293_22460, FVB16_04875, FWK02_06275, FZN31_02630, FZU14_21825, G3V95_19850, G3W53_20960, G4A38_21515, G4A47_20785, G5603_24590, G9448_17070, GAI89_24825, GAJ12_24715, GAJ26_22015, GGB84_004467, GIB53_19395, GJ11_21390, GKF52_21245, GKF66_21550, GKF89_18475, GNW61_16635, GOP14_004273, GOP25_22710, GP711_23310, GP954_00940, GP965_04300, GP975_01190, GP979_02000, GQA06_03945, GQM04_10570, GQM13_25205, GQM17_19920, GQM21_11235, GQN34_23270, GQW07_21545, GRO95_20810, GRW05_09065, GRW24_04750, GRW56_00300, GRW57_03535, GSM54_23325, GSY44_20005, GUC01_21185, GUI33_20050, H0O53_20825, H0O72_19420, H0P11_20920, H5Z35_004789, H6Y26_003164, HCQ42_003948, HEP30_018640, HEP34_004770, HHH44_004535, HI055_004140, HIE29_005187, HJY54_004753, HKA49_005035, HLQ92_22595, HLV18_23335, HLX92_10070, HLZ50_22175, HMV95_19610, HMW38_23110, HV109_02185, HV146_21675, HV209_14710, HVV39_09270, HVW04_17530, HVW43_18665, HVY77_02170, HVZ29_19100, HVZ30_02050, HVZ71_02355, HX136_02190, I6H00_20920, I6H02_11995, IFB95_004806, IUD45_003540, J0541_004397, J4S20_004802, J5U05_004087, J7T50_001453, JFD_01884, JFD_03713, JNP96_25310, KQ660_11775, NCTC10082_02839, NCTC10089_00502, NCTC10090_03527, NCTC10418_00690, NCTC10429_01095, NCTC10487_00445, NCTC10764_03863, NCTC10767_01516, NCTC10865_00661, NCTC10974_00551, NCTC11126_02771, NCTC11127_03223, NCTC11181_02738, NCTC11341_01889, NCTC12950_00479, NCTC13127_00786, NCTC4450_02475, NCTC7922_04042, NCTC7927_00551, NCTC7928_02516, NCTC8009_01511, NCTC8179_05942, NCTC8333_00489, NCTC8450_04937, NCTC8500_00335, NCTC8621_00508, NCTC8622_00507, NCTC8959_03261, NCTC8960_03070, NCTC8985_04982, NCTC9001_04254, NCTC9044_01356, NCTC9045_00566, NCTC9050_03611, NCTC9071_00483, NCTC9073_00380, NCTC9075_00724, NCTC9077_00604, NCTC9081_00918, NCTC9111_00867, NCTC9117_00756, NCTC9702_00537, NCTC9706_02737, NCTC9775_04003, NCTC9777_01891, NEP60_26295, OS110_25120, RG28_21615, SAMEA3472044_01162, SAMEA3472056_05411, SAMEA3752557_01952, SAMEA3753106_04634, TUM18780_04360, WR15_19610
UniProt
Find proteins for P0AG51 (Escherichia coli (strain K12)) Explore P0AG51  Go to UniProtKB:  P0AG51

Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L31	GA [auth a]	70	Escherichia coli	Mutation(s): 0  Gene Names: rpmE, b3936, JW3907
UniProt
Find proteins for P0A7M9 (Escherichia coli (strain K12)) Explore P0A7M9  Go to UniProtKB:  P0A7M9

Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L32	HA [auth b]	57	Escherichia coli	Mutation(s): 0  Gene Names:  rpmF, rpmF_1, A5U30_002830, A8502_000661, A9X72_15435, ACN81_09130, ACU57_04225, AM464_23480, AW118_12110, AWP47_13180, B6R15_001792, B6R31_003138, BANRA_01624, BCB93_002043, BER14_10210, BF481_002131, BG944_003607, BGM66_002729, BJI68_20640, BJJ90_15780, BK292_02505, BK383_03640, BKL28_002219, BTB68_003153, BTQ06_08080, BvCmsKKP061_02173, BvCmsSIP010_04163, BXT93_21825, C0P57_001747, C1Q91_003167, C2121_002257, C2M16_23600, C2R31_002348, C3F40_06530, C9E67_18185, C9Z68_07340, CA593_23040, CF22_003088, CG692_05970, CG704_04105, CG831_001542, CIG67_21935, CQ986_001084, CR538_15635, CR539_10135, CR628_002785, CTR35_002374, CV83915_00494, CY655_06595, D1912_08350, D3C88_19355, D3G36_11860, D4M65_04795, D4N09_11015, D9D43_11825, D9E49_23135, D9J61_04035, DD762_03625, DIV22_29035, DNQ45_10015, DNX30_12140, DQ87_002042, DS732_10505, DTL43_16270, DU321_22840, E4K51_18340, E5H86_12535, E6D34_10935, EAI46_03975, EC95NR1_05485, ECs1467, EEP55_000822, EIA08_02925, EIZ93_13150, EN85_002840, EPS76_00770, EPS97_06370, EWK56_20060, ExPECSC038_03490, F7F11_10320, F7N46_02450, F9413_18150, F9461_13585, F9B07_16900, FEJ01_12565, FIJ20_07300, FJQ40_00940, FKO60_17370, FOI11_007500, FOI11_14470, FPI65_06540, FPS11_20235, FTV92_08325, FTV93_08485, FV293_19565, FVB16_04695, FWK02_15570, FZN31_14620, FZU14_20010, G3V95_08050, G3W53_15755, G4A38_16050, G4A47_15410, G5603_00600, G8C01_10030, G9448_05130, GAI89_13280, GAJ12_13930, GGB84_000483, GJ11_06555, GKF66_05180, GNW61_10640, GOP25_17405, GP711_16475, GP954_12815, GP965_04045, GP975_03585, GP979_13150, GQA06_08430, GQM04_02110, GQM13_14340, GQM21_06935, GQN34_10245, GQW07_08880, GRO95_10420, GRW05_02410, GRW24_27585, GRW56_06550, GRW57_07595, GTP92_19120, GUC01_01680, H0O72_16850, HCQ42_001914, HEP30_011955, HEP34_001075, HHH44_003019, HI055_001485, HIE29_000052, HJQ60_005092, HLX92_03690, HLZ50_01830, HMV95_16370, HV109_14610, HV146_09250, HV209_29060, HVV39_00410, HVW04_05590, HVW43_06430, HVY77_15765, HVZ29_08715, HX086_07035, HX136_15650, I0E88_003516, I6H00_08540, I6H02_24530, IFB95_003696, IUC12_000121, J0541_003169, J5U05_002959, JNP96_10710, KV259_001392, KV317_003230, KV371_000953, KV406_001102, KV449_001342, KV455_003227, KV463_001049, KV469_000542, KV499_000679, KV500_001199, NCTC10082_00641, NCTC10089_03005, NCTC10090_00680, NCTC10418_04509, NCTC10764_02647, NCTC10767_05044, NCTC10865_03684, NCTC10974_03416, NCTC11126_00919, NCTC11181_00164, NCTC11341_04894, NCTC12950_03296, NCTC13148_05706, NCTC4450_04127, NCTC7922_00634, NCTC7927_03385, NCTC7928_00455, NCTC8009_05657, NCTC8179_02874, NCTC8333_03590, NCTC8621_03238, NCTC8622_05813, NCTC8959_00826, NCTC8960_00763, NCTC8985_01747, NCTC9044_04397, NCTC9045_03550, NCTC9073_01975, NCTC9075_04022, NCTC9077_03763, NCTC9081_03511, NCTC9117_03837, NCTC9706_00412, NCTC9962_06984, NEP60_22810, O5851_21660, RG28_16890, SAMEA3752557_01555, TUM18780_25170, WR15_23855
UniProt
Find proteins for P0A7N4 (Escherichia coli (strain K12)) Explore P0A7N4  Go to UniProtKB:  P0A7N4

Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L33	IA [auth c]	55	Escherichia coli	Mutation(s): 0  Gene Names:  rpmG, rpmG_1, A5U30_004136, A6592_21955, A8499_000792, A8502_002345, A9X72_00400, AC065_17670, ACN81_07125, ACU57_07205, AM464_10960, APX88_07835, AW118_10740, AWP47_15985, B6R12_001909, B6R15_003224, B6R17_003336, B6R31_002865, B6R48_003283, B6R87_003156, BANRA_04677, BB540_10150, BER14_16165, BF481_000671, BG944_002239, BGM66_003973, BHS81_21690, BJI68_21710, BJJ90_00390, BK292_09690, BK383_09650, BKL28_001549, BMT50_10565, BMT91_13845, BR158_003843, BTB68_002398, BTQ06_17850, BUO55_001749, BvCmsKKP061_03496, BvCmsSIP010_04504, BXT93_06220, BZL69_22230, C0P57_003843, C1Q91_001907, C2121_003322, C2M16_17175, C2R31_004081, C3F40_17705, C5N07_22255, C9E67_00890, C9Z68_15420, CA593_07900, CCS08_06865, CCU84_004237, CDL36_16035, CF22_002026, CG692_01875, CG704_10010, CG831_000991, CIG67_03795, CQ986_000108, CQB02_22645, CR538_00630, CR539_23800, CR628_001528, CRM83_20955, CTR35_001077, CV83915_02464, CWS33_14490, CX938_000998, CY655_23100, D3C88_33140, D3G36_09395, D4M65_14910, D4N09_11500, D6T60_21010, D9D43_20690, D9E34_16170, D9E49_10195, D9H94_14645, D9J03_19890, D9J61_14005, DD762_15060, DIV22_25130, DNQ45_17840, DNX30_21910, DS732_26145, DTL43_17805, DTL90_19180, DTM45_13255, DU321_24275, E0I52_14235, E4K51_19990, E5H86_15640, E6D34_14175, EA239_11595, EB534_RS18180, EC95NR1_03037, ECs4511, EIA08_13065, EIMP300_11190, EIZ93_22910, EN85_002943, EPS76_16410, EPS97_14120, ERS085406_02634, ERS139208_03027, EWK56_19235, ExPECSC038_00886, F3P10_10725, F7F11_22995, F7N46_06895, F9413_20155, F9461_04500, F9B07_09850, FA868_19515, FEJ01_05435, FFF58_21805, FGG80_07720, FHD44_20765, FHQ97_14415, FIJ20_14735, FJQ40_22750, FKO60_20795, FN993_001905, FOI11_017545, FOI11_05635, FPI65_22380, FPS11_15665, FTV92_18865, FTV93_19030, FV293_17885, FVB16_08575, FWK02_20790, FZN31_00850, FZU14_11310, G3V95_06555, G3W53_09755, G4A38_07645, G4A47_07035, G5603_14155, G9448_15395, GAI89_21025, GAJ12_25750, GAJ26_19905, GGB84_002816, GIB53_07680, GJ11_23260, GKF52_07040, GKF66_06090, GKF89_01305, GNW61_15010, GOP14_002925, GOP25_22240, GP711_14020, GP965_18420, GP975_06785, GQM04_18880, GQM13_19245, GQM17_16535, GQM21_20675, GQN34_13365, GQW07_04785, GRO95_05820, GRW05_17070, GRW24_04500, GRW56_13140, GRW57_14295, GSM54_05345, GSY44_19835, GUC01_19125, GUI33_04785, H0O53_07375, H0O72_08715, H0P11_12255, H5Z35_003529, H6Y26_001161, HCQ42_003479, HEP30_004320, HEP34_000581, HHH44_001955, HI055_001939, HIE29_002315, HJQ60_004388, HJY54_003834, HKA49_003561, HLQ92_16260, HLV18_18020, HLX92_21165, HLZ50_07765, HMV95_17960, HMW38_12345, HV109_00345, HV146_00330, HV209_24710, HVV39_10960, HVW04_15855, HVW43_16870, HVY77_00425, HVZ29_00305, HVZ30_00460, HVZ71_00385, HX136_00340, I6H00_19205, I6H02_13660, IFB95_001325, IUD45_003655, J0541_001519, J4S20_003173, J5U05_003670, J7T50_004317, JFD_02865, JFD_02951, JNP96_26980, KQ660_13480, NCTC10082_02483, NCTC10089_00164, NCTC10090_03179, NCTC10418_00180, NCTC10429_00616, NCTC10487_00103, NCTC10764_03481, NCTC10767_01151, NCTC10865_00201, NCTC10974_00127, NCTC11112_01599, NCTC11126_01709, NCTC11127_03609, NCTC11181_02394, NCTC11341_02337, NCTC12950_00092, NCTC13127_00380, NCTC4450_02132, NCTC7922_04520, NCTC7927_00189, NCTC7928_02970, NCTC8009_00971, NCTC8179_05536, NCTC8333_00121, NCTC8450_04550, NCTC8500_05792, NCTC8621_00171, NCTC8959_03599, NCTC8960_02723, NCTC8985_04527, NCTC9001_03782, NCTC9044_01835, NCTC9045_00169, NCTC9050_03266, NCTC9071_00140, NCTC9073_06389, NCTC9075_00237, NCTC9077_00137, NCTC9081_00502, NCTC9111_00516, NCTC9117_00296, NCTC9702_00106, NCTC9706_02375, NCTC9775_03637, NCTC9777_01519, NCTC9962_01072, NEP60_12970, OS110_19615, RG28_23350, SAMEA3472044_00655, SAMEA3472056_04704, SAMEA3752557_01144, SAMEA3753106_03495, TUM18780_00760, WR15_15810
UniProt
Find proteins for P0A7N9 (Escherichia coli (strain K12)) Explore P0A7N9  Go to UniProtKB:  P0A7N9

Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L34	JA [auth d]	46	Escherichia coli	Mutation(s): 0  Gene Names: rpmH
UniProt
Find proteins for P0A7P5 (Escherichia coli (strain K12)) Explore P0A7P5  Go to UniProtKB:  P0A7P5

Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L35	KA [auth e]	65	Escherichia coli	Mutation(s): 0  Gene Names: rpmI, b1717, JW1707
UniProt
Find proteins for P0A7Q1 (Escherichia coli (strain K12)) Explore P0A7Q1  Go to UniProtKB:  P0A7Q1

Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L36	LA [auth f]	38	Escherichia coli	Mutation(s): 0  Gene Names: rpmJ
UniProt
Find proteins for P0A7Q6 (Escherichia coli (strain K12)) Explore P0A7Q6  Go to UniProtKB:  P0A7Q6

Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S2	MA [auth g]	241	Escherichia coli	Mutation(s): 0  Gene Names: rpsB
UniProt
Find proteins for P0A7V0 (Escherichia coli (strain K12)) Explore P0A7V0  Go to UniProtKB:  P0A7V0

Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S3	NA [auth h]	233	Escherichia coli	Mutation(s): 0  Gene Names: rpsC
UniProt
Find proteins for P0A7V3 (Escherichia coli (strain K12)) Explore P0A7V3  Go to UniProtKB:  P0A7V3

Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S4	OA [auth i]	206	Escherichia coli	Mutation(s): 0  Gene Names: rpsD, ramA, b3296, JW3258
UniProt
Find proteins for P0A7V8 (Escherichia coli (strain K12)) Explore P0A7V8  Go to UniProtKB:  P0A7V8

Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS5	PA [auth j]	167	Escherichia coli 0.1197	Mutation(s): 0  Gene Names: rpsE, spc, b3303, JW3265
UniProt
Find proteins for P0A7W1 (Escherichia coli (strain K12)) Explore P0A7W1  Go to UniProtKB:  P0A7W1

Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S6	QA [auth k]	135	Escherichia coli	Mutation(s): 0  Gene Names: rpsF, b4200, JW4158
UniProt
Find proteins for P02358 (Escherichia coli (strain K12)) Explore P02358  Go to UniProtKB:  P02358

Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S7	RA [auth l]	179	Escherichia coli	Mutation(s): 0  Gene Names: rpsG, b3341, JW3303
UniProt
Find proteins for P02359 (Escherichia coli (strain K12)) Explore P02359  Go to UniProtKB:  P02359

Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS8	SA [auth m]	130	Escherichia coli	Mutation(s): 0  Gene Names: rpsH
UniProt
Find proteins for P0A7W7 (Escherichia coli (strain K12)) Explore P0A7W7  Go to UniProtKB:  P0A7W7

Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS9	TA [auth n]	130	Escherichia coli	Mutation(s): 0  Gene Names: rpsI
UniProt
Find proteins for P0A7X3 (Escherichia coli (strain K12)) Explore P0A7X3  Go to UniProtKB:  P0A7X3

Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS10	UA [auth o]	103	Escherichia coli	Mutation(s): 0  Gene Names: rpsJ
UniProt
Find proteins for P0A7R5 (Escherichia coli (strain K12)) Explore P0A7R5  Go to UniProtKB:  P0A7R5

Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S11	VA [auth p]	129	Escherichia coli	Mutation(s): 0  Gene Names: rpsK
UniProt
Find proteins for P0A7R9 (Escherichia coli (strain K12)) Explore P0A7R9  Go to UniProtKB:  P0A7R9

Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS12	WA [auth q]	124	Escherichia coli	Mutation(s): 0  Gene Names:  rpsL, rpsL_2, A5U30_003889, A6592_18175, A8499_001308, A8502_001035, A9X72_02055, AC065_16140, ACN81_28395, ACU57_16335, AM464_09350, APX88_20135, AW118_19390, AWP47_12580, B6R12_000406, B6R15_000411, B6R17_004092, B6R31_002238, B6R48_002865, B6R87_002647, BANRA_04338, BB540_24940, BER14_21580, BF481_000994, BG944_001143, BGM66_002197, BHS81_20025, BJI68_15120, BJJ90_01995, BK292_07945, BK383_21385, BKL28_001878, BMT50_12160, BMT91_03340, BR158_000836, BTB68_000004, BTQ06_10750, BUO55_003823, BvCmsKKP061_02719, BvCmsSIP010_02074, BXT93_17220, BZL69_05785, C0P57_000744, C1Q91_001774, C2121_001894, C2M16_10980, C2R31_002848, C3F40_19595, C5N07_11865, C9E67_02665, C9Z68_19360, CA593_09530, CCS08_20045, CCU84_000778, CDL36_09745, CF22_001801, CG692_18330, CG704_07645, CG831_001292, CIG67_21255, CQ986_000431, CQB02_21500, CR538_02285, CR539_21960, CR628_001376, CRM83_22785, CTR35_001824, CV83915_02769, CWS33_10820, CX938_000715, CY655_21380, D1912_26245, D3C88_25690, D3G36_06655, D4M65_08955, D4N09_12780, D6T60_05835, D9D43_04015, D9E34_05370, D9E49_05360, D9H94_02360, D9J03_02800, D9J61_04455, DD762_11810, DIV22_04600, DNQ45_18710, DNX30_18200, DS732_24475, DTL43_13765, DTL90_06910, DTM45_15580, DU321_12135, E0I52_09925, E4K51_10545, E5H86_09220, E6D34_04010, EA239_12250, EAI46_06760, EB534_RS01835, EC95NR1_02719, ECs4193, EIA08_12060, EIZ93_01385, EN85_000596, EPS76_12695, EPS97_04830, ERS085406_01915, ERS139208_04106, EWK56_16220, ExPECSC038_01207, F3P10_03820, F7F11_11880, F7N46_14475, F9413_23615, F9461_02860, F9B07_12795, FA868_17430, FEJ01_10185, FFF58_13835, FGG80_13730, FHD44_12480, FHQ97_05960, FIJ20_20680, FJQ40_03220, FKO60_13770, FN993_002408, FOI11_019055, FOI11_04125, FPI65_20520, FPS11_03565, FTV92_20575, FTV93_20685, FV293_08660, FVB16_09155, FWK02_07820, FZN31_02500, FZU14_04005, G3V95_05795, G3W53_10630, G4A38_16715, G4A47_18305, G5603_11210, G9448_16940, GAI89_06495, GAJ12_06765, GAJ26_22145, GGB84_001627, GIB53_18845, GJ11_21590, GKF52_05665, GKF66_04705, GKF89_12265, GNW61_19825, GOP14_000555, GOP25_12270, GP711_17590, GP965_17670, GQM04_08870, GQM13_20845, GQM17_11035, GQM21_13045, GQN34_11870, GQW07_20360, GRO95_19555, GRW05_23630, GRW24_12145, GRW56_12155, GRW57_13500, GSM54_01330, GSY44_04760, GUC01_14585, GUI33_18070, H0O53_20260, H0O72_13185, H0P11_14900, H5Z35_001968, H6Y26_003204, HCQ42_003768, HEP30_005280, HEP34_002415, HHH44_000548, HI055_002196, HIE29_002006, HJQ60_002804, HJY54_002830, HKA49_001073, HLQ92_04845, HLV18_11670, HLX92_09940, HLZ50_06780, HMV95_07635, HMW38_08385, HV109_01985, HV146_21805, HV209_14580, HVV39_09470, HVW04_17400, HVW43_18535, HVY77_01970, HVZ29_19230, HVZ30_01920, HVZ71_02225, HX136_01990, I6H00_20790, I6H02_12125, IFB95_001027, IUD45_003566, J0541_002092, J4S20_001155, J5U05_000731, J7T50_001493, JFD_01925, JFD_03753, JNP96_25510, KQ660_11905, NCTC10082_02799, NCTC10089_00476, NCTC10090_03501, NCTC10487_00418, NCTC10764_03836, NCTC10767_01481, NCTC10974_00472, NCTC11112_01085, NCTC11126_02723, NCTC11127_03263, NCTC11181_02712, NCTC11341_01920, NCTC12950_00439, NCTC13127_00758, NCTC13148_03489, NCTC4450_02449, NCTC7922_04088, NCTC7927_00509, NCTC8009_01480, NCTC8179_05915, NCTC8333_00463, NCTC8450_04911, NCTC8621_00480, NCTC8959_03287, NCTC8960_03044, NCTC8985_04955, NCTC9001_04208, NCTC9044_01386, NCTC9045_00521, NCTC9050_03585, NCTC9071_00443, NCTC9081_00877, NCTC9111_00841, NCTC9702_00511, NCTC9706_02614, NCTC9775_03976, NCTC9777_01848, NCTC9962_06745, NEP60_15855, OS110_10240, RG28_21750, SAMEA3472044_01122, SAMEA3472056_01947, SAMEA3752557_01992, SAMEA3753106_01938, TUM18780_04100, WR15_02645
UniProt
Find proteins for P0A7S3 (Escherichia coli (strain K12)) Explore P0A7S3  Go to UniProtKB:  P0A7S3

Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S13	XA [auth r]	118	Escherichia coli	Mutation(s): 0  Gene Names: rpsM, G711_03878
UniProt
Find proteins for P0A7S9 (Escherichia coli (strain K12)) Explore P0A7S9  Go to UniProtKB:  P0A7S9

Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS14	YA [auth s]	101	Escherichia coli	Mutation(s): 0  Gene Names: rpsN, NCTC9073_00385
UniProt
Find proteins for P0AG59 (Escherichia coli (strain K12)) Explore P0AG59  Go to UniProtKB:  P0AG59

Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS15	ZA [auth t]	89	Escherichia coli	Mutation(s): 0  Gene Names: rpsO
UniProt
Find proteins for P0ADZ4 (Escherichia coli (strain K12)) Explore P0ADZ4  Go to UniProtKB:  P0ADZ4

Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S16	AB [auth u]	82	Escherichia coli	Mutation(s): 0  Gene Names: rpsP
UniProt
Find proteins for P0A7T3 (Escherichia coli (strain K12)) Explore P0A7T3  Go to UniProtKB:  P0A7T3

Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS17	BB [auth v]	84	Escherichia coli	Mutation(s): 0  Gene Names: rpsQ
UniProt
Find proteins for P0AG63 (Escherichia coli (strain K12)) Explore P0AG63  Go to UniProtKB:  P0AG63

Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S18	CB [auth w]	75	Escherichia coli	Mutation(s): 0  Gene Names: rpsR
UniProt
Find proteins for P0A7T7 (Escherichia coli (strain K12)) Explore P0A7T7  Go to UniProtKB:  P0A7T7

Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS19	DB [auth x]	92	Escherichia coli	Mutation(s): 0  Gene Names: rpsS
UniProt
Find proteins for P0A7U3 (Escherichia coli (strain K12)) Explore P0A7U3  Go to UniProtKB:  P0A7U3

Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S20	EB [auth y]	87	Escherichia coli	Mutation(s): 0  Gene Names: rpsT
UniProt
Find proteins for P0A7U7 (Escherichia coli (strain K12)) Explore P0A7U7  Go to UniProtKB:  P0A7U7

Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S21	FB [auth z]	71	Escherichia coli	Mutation(s): 0  Gene Names: rpsU
UniProt
Find proteins for P68679 (Escherichia coli (strain K12)) Explore P68679  Go to UniProtKB:  P68679

Entity ID: 1
Molecule	Chains	Length	Organism	Image
23S ribosomal RNA	A [auth 1]	2,903	Escherichia coli

Entity ID: 2
Molecule	Chains	Length	Organism	Image
16S ribosomal RNA	B [auth 2]	1,534	Escherichia coli

Entity ID: 3
Molecule	Chains	Length	Organism	Image
5S ribosomal RNA	C [auth 4]	120	Escherichia coli

Entity ID: 4
Molecule	Chains	Length	Organism	Image
P-tRNA, E-tRNA	D [auth 5], E [auth 6]	77	Escherichia coli

Entity ID: 5
Molecule	Chains	Length	Organism	Image
mRNA	F [auth 7]	25	Escherichia coli

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	CS [auth f], YR [auth a]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG	AC [auth 1], AD [auth 1], AE [auth 1], AF [auth 1], AG [auth 1], AH [auth 1], AI [auth 1], AJ [auth 1], AK [auth 1], AL [auth 1], AM [auth 1], AN [auth 2], AO [auth 2], AP [auth 2], AQ [auth 2], AR [auth 2], AS [auth b], BC [auth 1], BD [auth 1], BE [auth 1], BF [auth 1], BG [auth 1], BH [auth 1], BI [auth 1], BJ [auth 1], BK [auth 1], BL [auth 1], BM [auth 1], BN [auth 2], BO [auth 2], BP [auth 2], BQ [auth 2], BR [auth 2], BS [auth f], CC [auth 1], CD [auth 1], CE [auth 1], CF [auth 1], CG [auth 1], CH [auth 1], CI [auth 1], CJ [auth 1], CK [auth 1], CL [auth 1], CM [auth 1], CN [auth 2], CO [auth 2], CP [auth 2], CQ [auth 2], CR [auth 2], DC [auth 1], DD [auth 1], DE [auth 1], DF [auth 1], DG [auth 1], DH [auth 1], DI [auth 1], DJ [auth 1], DK [auth 1], DL [auth 1], DM [auth 1], DN [auth 2], DO [auth 2], DP [auth 2], DQ [auth 2], DR [auth 2], DS [auth i], EC [auth 1], ED [auth 1], EE [auth 1], EF [auth 1], EG [auth 1], EH [auth 1], EI [auth 1], EJ [auth 1], EK [auth 1], EL [auth 1], EM [auth 1], EN [auth 2], EO [auth 2], EP [auth 2], EQ [auth 2], ER [auth 2], ES [auth r], FC [auth 1], FD [auth 1], FE [auth 1], FF [auth 1], FG [auth 1], FH [auth 1], FI [auth 1], FJ [auth 1], FK [auth 1], FL [auth 1], FM [auth 1], FN [auth 2], FO [auth 2], FP [auth 2], FQ [auth 2], FR [auth 2], GB [auth 1], GC [auth 1], GD [auth 1], GE [auth 1], GF [auth 1], GG [auth 1], GH [auth 1], GI [auth 1], GJ [auth 1], GK [auth 1], GL [auth 1], GM [auth 1], GN [auth 2], GO [auth 2], GP [auth 2], GQ [auth 2], GR [auth 2], HB [auth 1], HC [auth 1], HD [auth 1], HE [auth 1], HF [auth 1], HG [auth 1], HH [auth 1], HI [auth 1], HJ [auth 1], HK [auth 1], HL [auth 1], HM [auth 1], HN [auth 2], HO [auth 2], HP [auth 2], HQ [auth 2], HR [auth 4], IB [auth 1], IC [auth 1], ID [auth 1], IE [auth 1], IF [auth 1], IG [auth 1], IH [auth 1], II [auth 1], IJ [auth 1], IK [auth 1], IL [auth 1], IM [auth 1], IN [auth 2], IO [auth 2], IP [auth 2], IQ [auth 2], IR [auth 4], JB [auth 1], JC [auth 1], JD [auth 1], JE [auth 1], JF [auth 1], JG [auth 1], JH [auth 1], JI [auth 1], JJ [auth 1], JK [auth 1], JL [auth 1], JM [auth 1], JN [auth 2], JO [auth 2], JP [auth 2], JQ [auth 2], JR [auth 4], KB [auth 1], KC [auth 1], KD [auth 1], KE [auth 1], KF [auth 1], KG [auth 1], KH [auth 1], KI [auth 1], KJ [auth 1], KK [auth 1], KL [auth 1], KM [auth 1], KN [auth 2], KO [auth 2], KP [auth 2], KQ [auth 2], KR [auth 4], LB [auth 1], LC [auth 1], LD [auth 1], LE [auth 1], LF [auth 1], LG [auth 1], LH [auth 1], LI [auth 1], LJ [auth 1], LK [auth 1], LL [auth 1], LM [auth 1], LN [auth 2], LO [auth 2], LP [auth 2], LQ [auth 2], LR [auth 4], MB [auth 1], MC [auth 1], MD [auth 1], ME [auth 1], MF [auth 1], MG [auth 1], MH [auth 1], MI [auth 1], MJ [auth 1], MK [auth 1], ML [auth 1], MM [auth 2], MN [auth 2], MO [auth 2], MP [auth 2], MQ [auth 2], MR [auth 4], NB [auth 1], NC [auth 1], ND [auth 1], NE [auth 1], NF [auth 1], NG [auth 1], NH [auth 1], NI [auth 1], NJ [auth 1], NK [auth 1], NL [auth 1], NM [auth 2], NN [auth 2], NO [auth 2], NP [auth 2], NQ [auth 2], NR [auth 4], OB [auth 1], OC [auth 1], OD [auth 1], OE [auth 1], OF [auth 1], OG [auth 1], OH [auth 1], OI [auth 1], OJ [auth 1], OK [auth 1], OL [auth 1], OM [auth 2], ON [auth 2], OO [auth 2], OP [auth 2], OQ [auth 2], OR [auth 4], PB [auth 1], PC [auth 1], PD [auth 1], PE [auth 1], PF [auth 1], PG [auth 1], PH [auth 1], PI [auth 1], PJ [auth 1], PK [auth 1], PL [auth 1], PM [auth 2], PN [auth 2], PO [auth 2], PP [auth 2], PQ [auth 2], PR [auth 5], QB [auth 1], QC [auth 1], QD [auth 1], QE [auth 1], QF [auth 1], QG [auth 1], QH [auth 1], QI [auth 1], QJ [auth 1], QK [auth 1], QL [auth 1], QM [auth 2], QN [auth 2], QO [auth 2], QP [auth 2], QQ [auth 2], QR [auth 5], RB [auth 1], RC [auth 1], RD [auth 1], RE [auth 1], RF [auth 1], RG [auth 1], RH [auth 1], RI [auth 1], RJ [auth 1], RK [auth 1], RL [auth 1], RM [auth 2], RN [auth 2], RO [auth 2], RP [auth 2], RQ [auth 2], RR [auth 5], SB [auth 1], SC [auth 1], SD [auth 1], SE [auth 1], SF [auth 1], SG [auth 1], SH [auth 1], SI [auth 1], SJ [auth 1], SK [auth 1], SL [auth 1], SM [auth 2], SN [auth 2], SO [auth 2], SP [auth 2], SQ [auth 2], SR [auth 5], TB [auth 1], TC [auth 1], TD [auth 1], TE [auth 1], TF [auth 1], TG [auth 1], TH [auth 1], TI [auth 1], TJ [auth 1], TK [auth 1], TL [auth 1], TM [auth 2], TN [auth 2], TO [auth 2], TP [auth 2], TQ [auth 2], TR [auth 5], UB [auth 1], UC [auth 1], UD [auth 1], UE [auth 1], UF [auth 1], UG [auth 1], UH [auth 1], UI [auth 1], UJ [auth 1], UK [auth 1], UL [auth 1], UM [auth 2], UN [auth 2], UO [auth 2], UP [auth 2], UQ [auth 2], UR [auth A], VB [auth 1], VC [auth 1], VD [auth 1], VE [auth 1], VF [auth 1], VG [auth 1], VH [auth 1], VI [auth 1], VJ [auth 1], VK [auth 1], VL [auth 1], VM [auth 2], VN [auth 2], VO [auth 2], VP [auth 2], VQ [auth 2], VR [auth A], WB [auth 1], WC [auth 1], WD [auth 1], WE [auth 1], WF [auth 1], WG [auth 1], WH [auth 1], WI [auth 1], WJ [auth 1], WK [auth 1], WL [auth 1], WM [auth 2], WN [auth 2], WO [auth 2], WP [auth 2], WQ [auth 2], WR [auth C], XB [auth 1], XC [auth 1], XD [auth 1], XE [auth 1], XF [auth 1], XG [auth 1], XH [auth 1], XI [auth 1], XJ [auth 1], XK [auth 1], XL [auth 1], XM [auth 2], XN [auth 2], XO [auth 2], XP [auth 2], XQ [auth 2], XR [auth D], YB [auth 1], YC [auth 1], YD [auth 1], YE [auth 1], YF [auth 1], YG [auth 1], YH [auth 1], YI [auth 1], YJ [auth 1], YK [auth 1], YL [auth 1], YM [auth 2], YN [auth 2], YO [auth 2], YP [auth 2], YQ [auth 2], ZB [auth 1], ZC [auth 1], ZD [auth 1], ZE [auth 1], ZF [auth 1], ZG [auth 1], ZH [auth 1], ZI [auth 1], ZJ [auth 1], ZK [auth 1], ZL [auth 1], ZM [auth 2], ZN [auth 2], ZO [auth 2], ZP [auth 2], ZQ [auth 2], ZR [auth b]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
0TD	WA [auth q]	L-PEPTIDE LINKING	C5 H9 N O4 S		ASP

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.78 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-02-05 
Deposition Author(s): Tian, Y., Li, Q., Jin, H., Fatma, S., Zeng, F., Huang, R.H.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM145060
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM120764
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM120552
National Natural Science Foundation of China (NSFC)	China	32171200

Revision History  

• Version 1.0: 2025-02-05
  Type: Initial release