2CW8 | pdb_00002cw8

Crystal structure of intein homing endonuclease II


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFAN1_HTHe2cw8A1 A: alpha bundlesX: Inserted helical domain in fatty acid synthase subunit betaH: Voltage-gated ion channelsT: Voltage-gated ion channelsF: FAN1_HTHECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.170.16.10 Mainly Beta Beta Complex Endonuclease - Pi-scei Chain A, domain 1CATH (4.3.0)
A1.10.10.1010 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Intein homing endonuclease, domain IVCATH (4.3.0)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)
A1.10.8.1330 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF14528LAGLIDADG-like domain (LAGLIDADG_3)LAGLIDADG-like domainThis domain is part of the LAGLIDADG superfamily [1]. Domain
PF14890Intein splicing domain (Intein_splicing)Intein splicing domain- Family
PF18714DNA polymerase II intein Domain IV (PI-TkoII_IV)DNA polymerase II intein Domain IVThis domain can be found in the hyperthermophilic archaeon Thermococcus kodakaraensis Pol-2 intein. It is suggested to be a potential DNA binding domain [1, 2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Endonuclease PI-PkoII -