5JLF | pdb_00005jlf

Structure of the F-actin-tropomyosin complex (Reprocessed)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ee5jlfE1 A: beta-propeller-likeX: beta-propellerH: 9-bladedT: RRM_1F:ECOD (20:10:01)
De5jlfD1 A: beta-propeller-likeX: beta-propellerH: 9-bladedT: RRM_1F:ECOD (20:10:01)
Ce5jlfC1 A: beta-propeller-likeX: beta-propellerH: 9-bladedT: RRM_1F:ECOD (20:10:01)
Be5jlfB1 A: beta-propeller-likeX: beta-propellerH: 9-bladedT: RRM_1F:ECOD (20:10:01)
Ae5jlfA1 A: beta-propeller-likeX: beta-propellerH: 9-bladedT: RRM_1F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
E2.30.36.70 Mainly Beta Roll Actin Chain A, domain 2CATH (4.3.0)
E3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (4.3.0)
D3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
D2.30.36.70 Mainly Beta Roll Actin Chain A, domain 2CATH (4.3.0)
D3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (4.3.0)
C3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
C2.30.36.70 Mainly Beta Roll Actin Chain A, domain 2CATH (4.3.0)
C3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (4.3.0)
B3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
B2.30.36.70 Mainly Beta Roll Actin Chain A, domain 2CATH (4.3.0)
B3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (4.3.0)
A3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
A2.30.36.70 Mainly Beta Roll Actin Chain A, domain 2CATH (4.3.0)
A3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F, G
Tropomyosin Alpha-1---
A, B, C, D, E
Actin, alpha skeletal muscle

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR020902Actin/actin-like conserved siteConserved Site
A, B, C, D, E
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
A, B, C, D, E
IPR004001Actin, conserved siteConserved Site
A, B, C, D, E
IPR004000Actin familyFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
F, G
UNK
A, B, C, D, E
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322