Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5ky2b_ Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyEGF-type module 8069542 4003198 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyEGF/Laminin-like 8069543 3000412 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AO-FucT_Ce5ky2A2 A: a/b three-layered sandwichesX: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)T: UDP-Glycosyltransferase/glycogen phosphorylaseF: O-FucT_CECOD (1.6)
AO-FucT_Ne5ky2A1 A: a/b three-layered sandwichesX: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)T: UDP-Glycosyltransferase/glycogen phosphorylaseF: O-FucT_NECOD (1.6)
BhEGF_3e5ky2B1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.11340 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
A3.40.50.11350 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
B2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF10250GDP-fucose protein O-fucosyltransferase (O-FucT)GDP-fucose protein O-fucosyltransferase- Family
PF00008EGF-like domain (EGF)EGF-like domainThere is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
GDP-fucose protein O-fucosyltransferase 1
Coagulation factor VII