6TVO
Human CRM1-RanGTP in complex with Leptomycin B
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057412 | 3002022 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | ARM repeat-like | 8043363 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Ras | e6tvoB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
B [auth A] | CRM1_C | e6tvoA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: CRM1_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
B [auth A] | PF08389 | Exportin 1-like protein (Xpo1) | Exportin 1-like protein | - | Repeat |
B [auth A] | PF18784 | CRM1 / Exportin repeat 2 (CRM1_repeat_2) | CRM1 / Exportin repeat 2 | - | Repeat |
B [auth A] | PF18777 | Chromosome region maintenance or exportin repeat (CRM1_repeat) | Chromosome region maintenance or exportin repeat | - | Repeat |
B [auth A] | PF18787 | CRM1 / Exportin repeat 3 (CRM1_repeat_3) | CRM1 / Exportin repeat 3 | - | Repeat |
B [auth A] | PF03810 | Importin-beta N-terminal domain (IBN_N) | Importin-beta N-terminal domain | - | Repeat |
B [auth A] | PF08767 | CRM1 C terminal (CRM1_C) | CRM1 C terminal | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A [auth B] | IPR002041 | Ran GTPase | Family |
A [auth B] | IPR005225 | Small GTP-binding domain | Domain |
A [auth B] | IPR001806 | Small GTPase | Family |
B [auth A] | IPR041123 | Chromosome region maintenance repeat | Repeat |
B [auth A] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
B [auth A] | IPR041235 | Exportin-1, repeat 2 | Repeat |
B [auth A] | IPR001494 | Importin-beta, N-terminal domain | Domain |
B [auth A] | IPR011989 | Armadillo-like helical | Homologous Superfamily |
B [auth A] | IPR045065 | Exportin-1/5 | Family |
B [auth A] | IPR013598 | Exportin-1/Importin-beta-like | Domain |
B [auth A] | IPR014877 | Exportin-1, C-terminal | Domain |
B [auth A] | IPR040485 | Exportin-1, repeat 3 | Repeat |