7AM2

Intermediate assembly of the Large subunit from Leishmania major mitochondrial ribosome

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
TA [auth BH]	SCOP2B Superfamily	Cyclophilin-like	8103170	3000168	SCOP2B (2022-06-29)
BB [auth Bl]	SCOP2B Superfamily	Cyclophilin-like	8103168	3000168	SCOP2B (2022-06-29)
HB [auth CC]	SCOP2B Superfamily	ACP-like	8074650	3001805	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N [auth Q]	Ribosomal_L28_1,Methyltransf_5_2nd	e7am2Q1	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Mitoribosomal protein bL28m	F: Ribosomal_L28_1,Methyltransf_5_2nd	ECOD (1.6)
Q [auth T]	F_UNCLASSIFIED	e7am2T1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: F_UNCLASSIFIED	ECOD (1.6)
T [auth BA]	F_UNCLASSIFIED	e7am2BA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavoproteins/Phosphotyrosine protein phosphatases-like	T: Rhodanese/Cell cycle control phosphatase	F: F_UNCLASSIFIED	ECOD (1.6)
X [auth CB]	RsfS	e7am2CB1	A: a+b three layers	X: Nucleotidyltransferase-like	H: Nucleotidyltransferase (From Topology)	T: Nucleotidyltransferase	F: RsfS	ECOD (1.6)
CA [auth BO]	Ribosomal_L14	e7am2BO1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
OA [auth Am]	PPR_long	e7am2Am1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PPR_long	ECOD (1.6)
QA [auth BG]	F_UNCLASSIFIED	e7am2BG1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: F_UNCLASSIFIED	ECOD (1.6)
RA [auth Ad]	Img2	e7am2Ad1	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: Img2	ECOD (1.6)
TA [auth BH]	Pro_isomerase	e7am2BH1	A: beta barrels	X: Cyclophilin-like (From Topology)	H: Cyclophilin-like (From Topology)	T: Cyclophilin-like	F: Pro_isomerase	ECOD (1.6)
E [auth F]	Ribosomal_L13	e7am2F1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
BB [auth Bl]	Pro_isomerase	e7am2Bl1	A: beta barrels	X: Cyclophilin-like (From Topology)	H: Cyclophilin-like (From Topology)	T: Cyclophilin-like	F: Pro_isomerase	ECOD (1.6)
FB [auth BX]	SpoU_sub_bind_1	e7am2BX2	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: SpoU_sub_bind_1	ECOD (1.6)
FB [auth BX]	SpoU_methylase	e7am2BX1	A: a/b three-layered sandwiches	X: alpha/beta knot (From Topology)	H: alpha/beta knot (From Topology)	T: alpha/beta knot	F: SpoU_methylase	ECOD (1.6)
EB [auth BY]	SpoU_sub_bind_1	e7am2BY2	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: SpoU_sub_bind_1	ECOD (1.6)
EB [auth BY]	SpoU_methylase	e7am2BY1	A: a/b three-layered sandwiches	X: alpha/beta knot (From Topology)	H: alpha/beta knot (From Topology)	T: alpha/beta knot	F: SpoU_methylase	ECOD (1.6)
GB [auth BZ]	F_UNCLASSIFIED	e7am2BZ2	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: F_UNCLASSIFIED	ECOD (1.6)
GB [auth BZ]	PseudoU_synth_2	e7am2BZ1	A: a+b two layers	X: Alpha-beta plaits	H: Pseudouridine synthase (From Topology)	T: Pseudouridine synthase	F: PseudoU_synth_2	ECOD (1.6)
HB [auth CC]	PP-binding	e7am2CC1	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
IB [auth CD]	F_UNCLASSIFIED	e7am2CD1	A: alpha bundles	X: LYR protein (From Topology)	H: LYR protein (From Topology)	T: LYR protein	F: F_UNCLASSIFIED	ECOD (1.6)
JB [auth BT]	MnmE_helical_2nd	e7am2BT1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
KB [auth BU]	KH_dom-like	e7am2BU2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Probable GTPase Der, C-terminal domain (From Topology)	T: Probable GTPase Der, C-terminal domain	F: KH_dom-like	ECOD (1.6)
KB [auth BU]	MnmE_helical_2nd	e7am2BU3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
MB [auth BV]	MnmE_helical_2nd	e7am2BV1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
J [auth L]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
K [auth M]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
O [auth R]	PF06984	Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)	-	Family
B	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
X [auth CB]	PF02410	Ribosomal silencing factor during starvation (RsfS)	Ribosomal silencing factor during starvation	-	Family
CA [auth BO]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e	-	Domain
C	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain	-	Domain
KA [auth Ab]	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
D [auth E]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
D [auth E]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain	-	Domain
OA [auth Am]	PF13041	PPR repeat family (PPR_2)	PPR repeat family	-	Repeat
TA [auth BH]	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].	Domain
E [auth F]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
BB [auth Bl]	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].	Domain
CB [auth Ax]	PF00412	LIM domain (LIM)	LIM domain	This family represents two copies of the LIM structural domain.	Domain
EB [auth BY], FB [auth BX]	PF00588	SpoU rRNA Methylase family (SpoU_methylase)	SpoU rRNA Methylase family	-	Family
GB [auth BZ]	PF00849	RNA pseudouridylate synthase (PseudoU_synth_2)	RNA pseudouridylate synthase	-	Family
HB [auth CC]	PF00550	Phosphopantetheine attachment site (PP-binding)	Phosphopantetheine attachment site	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.	Domain
F [auth G]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	-	Family
JB [auth BT]	PF01926	50S ribosome-binding GTPase (MMR_HSR1)	50S ribosome-binding GTPase	-	Family
KB [auth BU]	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal (KH_dom-like)	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	The KH-like domain at the C-terminus of the EngA subfamily of essential bacterial GTPases has a unique domain structure position. The two adjacent GTPase domains (GD1 and GD2), two domains of family MMR_HSR1, Pfam:PF01926, pack at either side of the ...	The KH-like domain at the C-terminus of the EngA subfamily of essential bacterial GTPases has a unique domain structure position. The two adjacent GTPase domains (GD1 and GD2), two domains of family MMR_HSR1, Pfam:PF01926, pack at either side of the C-terminal domain. This C-terminal domain resembles a KH domain but is missing the distinctive RNA recognition elements. Conserved motifs of the nucleotide binding site of GD1 are integral parts of the GD1-KH domain interface, suggesting the interactions between these two domains are directly influenced by the GTP/GDP cycling of the protein. In contrast, the GD2-KH domain interface is distal to the GDP binding site of GD2. This family has not been added to the KH clan since SCOP classifies it separately due to its missing the key KH motif/fold.	Domain
KB [auth BU]	PF01926	50S ribosome-binding GTPase (MMR_HSR1)	50S ribosome-binding GTPase	-	Family
LB [auth BW]	PF00270	DEAD/DEAH box helicase (DEAD)	DEAD/DEAH box helicase	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.	Domain
MB [auth BV]	PF01926	50S ribosome-binding GTPase (MMR_HSR1)	50S ribosome-binding GTPase	-	Family
G [auth I]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ribosomal protein L3-like protein	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
J [auth L]	bL21m	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
K [auth M]	uL22m	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome large ribosomal subunit non-membrane-bounded organelle
L [auth N]	uL23m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular anatomical structure cytoplasm cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
M [auth O]	uL24m	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
N [auth Q]	bL28m	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
O [auth R]	uL29m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection organelle cytoplasm protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection organelle cytoplasm protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome intracellular membrane-bounded organelle organelle lumen ribonucleoprotein complex intracellular non-membrane-bounded organelle nucleus nuclear lumen
P [auth S]	uL30m	-	-	membrane cellular anatomical entity
Q [auth T]	bL32m	-	-	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
R [auth V]	bL35m	-	-	-
S [auth Z]	mL41	-	-	-
B	uL4m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular anatomical structure cytoplasm cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle
T [auth BA]	mL94	-	-	-
U [auth CA]	TRUD domain-containing protein	RNA binding binding organic cyclic compound binding nucleic acid binding isomerase activity pseudouridine synthase activity catalytic activity intramolecular transferase activity	pseudouridine synthesis RNA metabolic process primary metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process RNA modification organic substance metabolic process macromolecule modification metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity
V [auth UA]	UA	-	-	-
W [auth BB]	mL95	-	-	-
X [auth CB]	RNA uridylyltransferase	ribonucleoprotein complex binding protein-containing complex binding binding ribosomal large subunit binding ribosome binding	regulation of biological process ribonucleoprotein complex biogenesis regulation of cellular process biological regulation negative regulation of biological process regulation of ribosome biogenesis regulation of cellular component biogenesis cellular component biogenesis ribosome biogenesis negative regulation of cellular process negative regulation of ribosome biogenesis cellular process cellular component organization or biogenesis cellular biosynthetic process regulation of biological process ribonucleoprotein complex biogenesis regulation of cellular process biological regulation negative regulation of biological process regulation of ribosome biogenesis regulation of cellular component biogenesis cellular component biogenesis ribosome biogenesis negative regulation of cellular process negative regulation of ribosome biogenesis cellular process cellular component organization or biogenesis cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process	-
Y [auth BK]	mL67	-	-	-
Z [auth BQ]	mL71	-	-	-
AA [auth BN]	mL81	-	-	-
BA [auth BE]	mL98	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast
CA [auth BO]	Putative ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
C	RIBOSOMAL_L9 domain-containing protein	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle ciliary plasm cilium cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle ciliary plasm cilium cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection nucleus membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear lumen
DA [auth At]	mL86	-	-	intracellular anatomical structure cytoplasm cellular anatomical entity
EA [auth Au]	mL87	-	-	-
FA [auth Ae]	mL53	-	-	-
GA [auth Af]	mL63	-	-	-
HA [auth Ah]	mL68	-	-	-
IA [auth Ap]	mL80	-	-	-
JA [auth Al]	mL74	-	-	-
KA [auth Ab]	L51_S25_CI-B8 domain-containing protein	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
LA [auth Aa]	mL42	-	-	-
MA [auth BP]	mL52,mL52	-	-	-
D [auth E]	Putative ribosomal protein L11	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle
NA [auth Az]	mL93	-	-	-
OA [auth Am]	mL75	RNA binding binding organic cyclic compound binding nucleic acid binding	-	intracellular anatomical structure cytoplasm cellular anatomical entity
PA [auth As]	mL85	-	-	-
QA [auth BG]	mL100	-	-	-
RA [auth Ad]	mL49	-	-	-
SA [auth Aw]	mL89	-	-	-
TA [auth BH]	Peptidyl-prolyl cis-trans isomerase	amide binding binding cyclosporin A binding isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection organelle cytoplasm nucleus membrane-enclosed lumen intracellular membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection organelle cytoplasm nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen nuclear lumen
UA [auth Aj]	mL72	-	-	-
VA [auth Ar]	mL84	-	-	-
WA [auth An]	mL76	-	-	-
E [auth F]	50S ribosomal protein L13-like protein	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome organelle lumen ribonucleoprotein complex intracellular non-membrane-bounded organelle
XA [auth BF]	mL99	-	-	-
YA [auth Av]	mL88	-	-	-
ZA [auth BM]	mL70	-	-	intracellular anatomical structure cytoplasm cellular anatomical entity
AB [auth Ag]	mL59/64	-	-	-
BB [auth Bl]	Peptidyl-prolyl cis-trans isomerase	amide binding binding cyclosporin A binding isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity
CB [auth Ax]	LIM zinc-binding domain-containing protein	cation binding ion binding binding metal ion binding small molecule binding	-	-
DB [auth BS]	DNAj-like protein	unfolded protein binding protein binding binding protein folding chaperone protein-folding chaperone binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
EB [auth BY], FB [auth BX]	SpoU_methylase domain-containing protein	RNA methyltransferase activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA binding binding organic cyclic compound binding nucleic acid binding	cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process	-
GB [auth BZ]	Pseudouridylate synthase-like protein	RNA binding binding organic cyclic compound binding nucleic acid binding isomerase activity pseudouridine synthase activity catalytic activity intramolecular transferase activity	pseudouridine synthesis RNA metabolic process primary metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process RNA modification organic substance metabolic process macromolecule modification metabolic process macromolecule metabolic process	-
HB [auth CC]	Acyl carrier protein	phosphopantetheine-dependent carrier activity prosthetic group binding binding acyl carrier activity molecular carrier activity ACP phosphopantetheine attachment site binding acyl binding small molecule binding	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process cellular biosynthetic process cellular metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process organic substance metabolic process biosynthetic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process cellular biosynthetic process cellular metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process cellular lipid metabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle respiratory chain complex mitochondrial respiratory chain complex I protein-containing complex mitochondrial membrane organelle inner membrane mitochondrial respirasome membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle respiratory chain complex mitochondrial respiratory chain complex I protein-containing complex mitochondrial membrane organelle inner membrane mitochondrial respirasome membrane protein complex transporter complex NADH dehydrogenase complex organelle envelope oxidoreductase complex mitochondrial protein-containing complex catalytic complex membrane mitochondrial inner membrane inner mitochondrial membrane protein complex transmembrane transporter complex respiratory chain complex I mitochondrial envelope respirasome organelle membrane membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
F [auth G]	Ribosomal_L18e/L15P domain-containing protein	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome ribosome large ribosomal subunit organellar large ribosomal subunit non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle
IB [auth CD]	L0R8F8	-	-	-
JB [auth BT]	G domain-containing protein	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process organonitrogen compound metabolic process mitochondrial translation cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
KB [auth BU]	GTPase Der	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast
LB [auth BW]	DEAD/DEAH box helicase-like protein	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding hydrolase activity catalytic activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity RNA helicase activity ATP-dependent activity, acting on RNA ATP-dependent activity	ribonucleoprotein complex biogenesis organelle assembly mitochondrial large ribosomal subunit assembly protein-containing complex organization non-membrane-bounded organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly mitochondrial large ribosomal subunit assembly protein-containing complex organization non-membrane-bounded organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial ribosome assembly ribosome assembly	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
MB [auth BV]	G domain-containing protein	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	-	-
NB [auth U7]	mL78	-	-	-
OB [auth U6]	U6	-	-	-
PB [auth U1]	U1	-	-	-
QB [auth U3]	U3	-	-	-
RB [auth U4]	U4	-	-	-
G [auth I]	Putative 50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure cellular anatomical entity ribosomal subunit intracellular organelle organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome large ribosomal subunit non-membrane-bounded organelle
SB [auth U5]	U5	-	-	-
TB [auth BR]	mL78	-	-	-
UB [auth U2]	U2	-	-	-
VB [auth 1]	Ribosomal RNA	-	-	-
WB [auth R1]	R1	-	-	-
XB [auth R2]	R2	-	-	-
YB [auth R5]	R5	-	-	-
ZB [auth U8]	U8	-	-	-
H [auth J]	bL19m	-	-	intracellular anatomical structure cytoplasm cellular anatomical entity
I [auth K]	bL20m	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast protein-containing complex ribonucleoprotein complex mitochondrial ribosome membrane-enclosed lumen mitochondrial matrix membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle kinetoplast protein-containing complex ribonucleoprotein complex mitochondrial ribosome membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organellar ribosome organelle lumen intracellular non-membrane-bounded organelle ribosome non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR019927	Large ribosomal subunit protein uL3, bacterial/organelle-type	Family
A	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
A	IPR000597	Large ribosomal subunit protein uL3	Family
J [auth L]	IPR028909	Large ribosomal subunit protein bL21-like	Family
J [auth L]	IPR001787	Large ribosomal subunit protein bL21	Family
J [auth L]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
K [auth M]	IPR047867	Large ribosomal subunit protein uL22, bacterial/organelle-type	Family
K [auth M]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
K [auth M]	IPR001063	Large ribosomal subunit protein uL22	Family
L [auth N]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
L [auth N]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
L [auth N]	IPR013025	Large ribosomal subunit protein uL23-like	Family
M [auth O]	IPR003256	Large ribosomal subunit protein uL24	Family
M [auth O]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
M [auth O]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
M [auth O]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
M [auth O]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
N [auth Q]	IPR026569	Large ribosomal subunit protein bL28	Family
O [auth R]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
O [auth R]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
P [auth S]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
B	IPR013005	Large ribosomal subunit protein uL4-like	Family
B	IPR002136	Large ribosomal subunit protein uL4	Family
B	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
U [auth CA]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
U [auth CA]	IPR042214	Pseudouridine synthase, TruD, catalytic domain	Homologous Superfamily
U [auth CA]	IPR001656	Pseudouridine synthase, TruD	Family
U [auth CA]	IPR011760	Pseudouridine synthase, TruD, insertion domain	Domain
X [auth CB]	IPR043519	Nucleotidyltransferase superfamily	Homologous Superfamily
X [auth CB]	IPR004394	Protein Iojap/ribosomal silencing factor RsfS	Family
Z [auth BQ]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
CA [auth BO]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
CA [auth BO]	IPR000218	Large ribosomal subunit protein uL14	Family
C	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
KA [auth Ab]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
KA [auth Ab]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
KA [auth Ab]	IPR039927	Large ribosomal subunit protein mL43	Family
D [auth E]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
D [auth E]	IPR000911	Ribosomal protein uL11	Family
D [auth E]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
D [auth E]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
D [auth E]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
OA [auth Am]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
OA [auth Am]	IPR002885	Pentatricopeptide repeat	Repeat
TA [auth BH]	IPR029000	Cyclophilin-like domain superfamily	Homologous Superfamily
TA [auth BH]	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Domain
TA [auth BH]	IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	Conserved Site
UA [auth Aj]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
E [auth F]	IPR005822	Large ribosomal subunit protein uL13	Family
E [auth F]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
BB [auth Bl]	IPR029000	Cyclophilin-like domain superfamily	Homologous Superfamily
BB [auth Bl]	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Domain
CB [auth Ax]	IPR001781	Zinc finger, LIM-type	Domain
DB [auth BS]	IPR001623	DnaJ domain	Domain
DB [auth BS]	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
EB [auth BY], FB [auth BX]	IPR001537	tRNA/rRNA methyltransferase, SpoU type	Domain
EB [auth BY], FB [auth BX]	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	Homologous Superfamily
EB [auth BY], FB [auth BX]	IPR029028	Alpha/beta knot methyltransferases	Homologous Superfamily
EB [auth BY], FB [auth BX]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
GB [auth BZ]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
GB [auth BZ]	IPR006145	Pseudouridine synthase, RsuA/RluA-like	Domain
HB [auth CC]	IPR006162	Phosphopantetheine attachment site	PTM
HB [auth CC]	IPR009081	Phosphopantetheine binding ACP domain	Domain
HB [auth CC]	IPR036736	ACP-like superfamily	Homologous Superfamily
HB [auth CC]	IPR003231	Acyl carrier protein	Family
F [auth G]	IPR005749	Large ribosomal subunit protein uL15, bacterial-type	Family
F [auth G]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
F [auth G]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
JB [auth BT]	IPR006073	GTP binding domain	Domain
JB [auth BT]	IPR023179	GTP-binding protein, orthogonal bundle domain superfamily	Homologous Superfamily
JB [auth BT]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
KB [auth BU]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
KB [auth BU]	IPR016484	GTPase Der	Family
KB [auth BU]	IPR032859	GTPase Der, C-terminal KH-domain-like	Domain
KB [auth BU]	IPR005225	Small GTP-binding protein domain	Domain
KB [auth BU]	IPR006073	GTP binding domain	Domain
KB [auth BU]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
LB [auth BW]	IPR001650	Helicase, C-terminal domain-like	Domain
LB [auth BW]	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
LB [auth BW]	IPR014014	RNA helicase, DEAD-box type, Q motif	Domain
LB [auth BW]	IPR011545	DEAD/DEAH box helicase domain	Domain
LB [auth BW]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
MB [auth BV]	IPR030393	EngB-type guanine nucleotide-binding (G) domain	Domain
MB [auth BV]	IPR006073	GTP binding domain	Domain
MB [auth BV]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
G [auth I]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
G [auth I]	IPR000456	Large ribosomal subunit protein bL17	Family
I [auth K]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
I [auth K]	IPR005813	Large ribosomal subunit protein bL20	Family