3DHH

Crystal Structure of Resting State Toluene 4-Monoxygenase Hydroxylase Complexed with Effector Protein


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.5291AMMONIUM ACETATE, PEG 3350, BIS-TRIS, pH 6.5, vapor diffusion, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.2545.27

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 100.418α = 90
b = 115.613β = 90
c = 182.403γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray91CCDMARMOSAIC 300 mm CCD2008-02-06molecular replacement
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 23-ID-D0.9793APS23-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9410099.60.0547.377912
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.942.011000.2036.67754

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9491.2977871388999.440.1590.1570.202RANDOM25.49
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.14-0.730.87
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.354
r_dihedral_angle_4_deg20.415
r_dihedral_angle_3_deg14.407
r_dihedral_angle_1_deg5.717
r_scangle_it3.566
r_scbond_it2.34
r_mcangle_it1.455
r_angle_refined_deg1.392
r_mcbond_it0.925
r_nbtor_refined0.306
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.354
r_dihedral_angle_4_deg20.415
r_dihedral_angle_3_deg14.407
r_dihedral_angle_1_deg5.717
r_scangle_it3.566
r_scbond_it2.34
r_mcangle_it1.455
r_angle_refined_deg1.392
r_mcbond_it0.925
r_nbtor_refined0.306
r_symmetry_vdw_refined0.243
r_symmetry_hbond_refined0.22
r_nbd_refined0.207
r_xyhbond_nbd_refined0.133
r_chiral_restr0.104
r_metal_ion_refined0.045
r_bond_refined_d0.015
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8035
Nucleic Acid Atoms
Solvent Atoms766
Heterogen Atoms65

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction