X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7293Hepes, Magnesium Formate, PEG 3350, pH 7.0, vapor diffusion, hanging drop, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.2645.56

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 41.74α = 90
b = 70.727β = 94.69
c = 154.412γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2006-11-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 17-ID1APS17-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.75154.32267422674

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.75154.32267422662115996.250.2070.2070.2040.263RANDOM41.475
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.95-0.44-2.021
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.331
r_dihedral_angle_3_deg17.659
r_dihedral_angle_4_deg16.294
r_dihedral_angle_1_deg11.802
r_angle_refined_deg1.49
r_angle_other_deg0.98
r_scangle_it0.939
r_scbond_it0.64
r_mcangle_it0.374
r_mcbond_it0.281
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.331
r_dihedral_angle_3_deg17.659
r_dihedral_angle_4_deg16.294
r_dihedral_angle_1_deg11.802
r_angle_refined_deg1.49
r_angle_other_deg0.98
r_scangle_it0.939
r_scbond_it0.64
r_mcangle_it0.374
r_mcbond_it0.281
r_symmetry_vdw_other0.261
r_symmetry_hbond_refined0.247
r_nbd_refined0.211
r_symmetry_vdw_refined0.208
r_nbd_other0.204
r_nbtor_refined0.185
r_xyhbond_nbd_refined0.151
r_chiral_restr0.108
r_xyhbond_nbd_other0.09
r_nbtor_other0.086
r_mcbond_other0.074
r_bond_refined_d0.011
r_bond_other_d0.004
r_gen_planes_refined0.004
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7073
Nucleic Acid Atoms
Solvent Atoms159
Heterogen Atoms

Software

Software
Software NamePurpose
XSCALEdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction