GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4D0N designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4D0N_GDP_A_1182 | 60% | 23% | 0.144 | 0.93 | 1.8 | 1.39 | 4 | 5 | 0 | 0 | 100% | 1 |
| 8GI6_GDP_A_201 | 99% | 58% | 0.051 | 0.986 | 0.95 | 0.68 | 2 | 1 | 0 | 0 | 100% | 1 |
| 5IRC_GDP_F_201 | 99% | 38% | 0.046 | 0.978 | 1.19 | 1.23 | 3 | 5 | 0 | 0 | 100% | 1 |
| 1OW3_GDP_B_680 | 98% | 39% | 0.059 | 0.985 | 1.05 | 1.33 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8FPX_GDP_A_201 | 97% | 47% | 0.063 | 0.98 | 1.02 | 1.03 | 2 | 2 | 0 | 0 | 100% | 1 |
| 8GI3_GDP_A_201 | 97% | 57% | 0.068 | 0.983 | 0.99 | 0.66 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
