Ligand validation:9KRD


HEC: HEME C

HEC is a Ligand Of Interest in 9KRD designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9KRD_HEC_D_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9KRD_HEC_D_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9KRD_HEC_D_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
9KRD_HEC_D_101 99% 12% 0.054 0.9832.18 1.85 3 400100%1
9KRD_HEC_B_101 98% 12% 0.059 0.9812.19 1.84 4 400100%1
9KRD_HEC_A_101 98% 13% 0.06 0.982.06 1.94 3 500100%1
9KRD_HEC_C_101 96% 13% 0.066 0.9772.08 1.93 4 430100%1
9KRC_HEC_A_101 99% 13% 0.053 0.9852.24 1.77 3 410100%1
3NWV_HEC_D_105 100% 9% 0.028 0.9942.17 2.31 6 950100%1
6WZ7_HEC_A_201 100% 14% 0.03 0.9961.89 1.95 4 940100%1
7B21_HEC_AAA_101 100% 34% 0.027 0.9971.31 1.31 3 520100%1
7TEP_HEC_C_201 100% 8% 0.029 0.9962.13 2.45 5 10210100%1
8QGF_HEC_A_503 100% 32% 0.03 0.9961.09 1.61 3 400100%1