Developers: Switch to Sequence Coordinates Service by May 31, 2025

11/11 

A new Sequence Coordinates Service more effectively integrates the growing number of protein structures and introduces several minor API changes to better support access to RCSB PDB features.

The old 1D Coordinates Service API will remain operational for a limited period ending May 31, 2025.

Documentation is available to assist developers in migrating to the new Sequence Coordinates Service.

Please contact RCSB PDB with any questions or concerns.

The new Sequence Coordinates Service supports better access to RCSB PDB features

New Features Index

• 12/17 Paper Published: ZMPY3D

• 12/03 Watch the Webinar: Python Scripting for Molecular Docking

• 11/27 wwPDB News: Access SDF/MOL formatted CCD files from the PDB archive

• 11/19 Paper Published: Using Augmented Reality

• 11/11 Developers: Switch to Sequence Coordinates Service by May 31, 2025

• 11/04 Take the Visualization User Survey and Win

• 10/31 wwPDB News: Deprecation of FTP File Download Protocol on November 1, 2024

• 10/29 wwPDB News: Poster Prize Awarded at The Protein Society

• 10/25 Register for Upcoming Training Events

• 10/22 wwPDB News: Poster Prize Awarded at LACA

• 10/16 wwPDB News: The Nobel Prize in Chemistry 2024

• 10/16 Register for the November 4 Mol* Virtual Office Hour

• 10/09 Register for the November 7 Virtual Office Hour on Supporting Extended PDB IDs

• 10/08 wwPDB News: Annotation of Protein Modifications in the PDB

• 09/29 Register Now for Webinar: Unlock Rapid Analyses Across the Whole PDB Using BinaryCIF

• 09/25 Register for the October 8 Advanced Search Office Hour

• 09/24 Announcement and FAQ: EDMAPS.rcsb.org Shutdown October 16

• 09/23 Applications Open for Director

• 09/21 Watch the Webinar: Teaching Enzymology

• 09/17 wwPDB News: Deprecation of FTP File Download Protocol on November 1, 2024

• 09/17 Deprecation of ligand model coordinates in SDF format starting Dec 10

• 09/15 Celebrating National Postdoc Appreciation Week

• 08/26 Register for the Sept 18 Virtual Office Hour on Molecular Animations

• 08/21 Register for the Sept 12 Virtual Office Hour: Streamlining PDB Deposition

• 08/14 Register for the Sept 9 Mol* Virtual Office Hour

• 08/14 wwPDB News: PDB Archive Serves Structures Determined by Integrative and Hybrid Methods (IHM)

• 08/05 Join our DevOps Team at Rutgers

• 07/03 Meet the RCSB PDB at ISMB

• 06/28 Register for the July 9 Virtual Office Hour on APIs

• 06/25 Register Now for Webinar on Teaching Enzymology

• 06/18 Register Now for Crash Course: Python Scripting for Molecular Docking

• 06/11 Register for the July 9 Virtual Office Hour on APIs

• 06/04 Register for June 13 Virtual Office Hour: Generating DSN6 and MTZ Files

• 05/27 Notice: NGL Viewer Deprecation

• 05/14 Switch from MMTF to BCIF

• 05/09 Announcement: EDMAPS.rcsb.org Shutdown

• 05/01 Register Now for a Webinar on Understanding PDB Validation: Which experimental structures should I rely on?

• 04/30 wwPDB News: Coming soon: Annotation of Protein Modifications in the PDB

• 04/01 Register Now for a Virtual Deep Dive into Computed Structure Model Exploration at RCSB.org

• 03/31 Explore Mechanism and Catalytic Site Annotations

• 03/29 Take the EDMAPS.rcsb.org Survey

• 03/24 Register for the April 1 Mol* Virtual Office Hour

• 03/12 wwPDB News: Paper Published on CryoEM Archiving and Validation Recommendations

• 02/25 Register for the March 28 Office Hour to Ask A Biocurator

• 02/12 Use a Python Package to Access the RCSB PDB Search API

• 01/30 Notice: NGL Viewer Deprecation

• 01/24 Take the CSM User Survey and Win

• 01/18 Undergrads: Spend your summer with RCSB PDB

• 01/15 Switch from MMTF to BCIF

• 01/08 wwPDB News: Resources for Supporting the Extended PDB ID Format (pdb_00001abc)

• 01/07 Applications Open for Director

• 01/03 wwPDB News: Time-stamped Copies of PDB and EMDB Archives